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Review Article

Biochemical mechanism and biological effects of the inhibition of silent information regulator 1 (SIRT1) by EX-527 (SEN0014196 or selisistat)

, &
Pages 1124-1136 | Received 17 Feb 2020, Accepted 12 Apr 2020, Published online: 05 May 2020

Figures & data

Figure 1. Structures of SIRT1 inhibitors EX-527 and its analogue Compound 35, indicating their absolute stereochemistry and the corresponding names used in the literatureCitation15. EX-527 and CHIC-35 are now commercially available from suppliers.

Figure 1. Structures of SIRT1 inhibitors EX-527 and its analogue Compound 35, indicating their absolute stereochemistry and the corresponding names used in the literatureCitation15. EX-527 and CHIC-35 are now commercially available from suppliers.

Scheme 1. Chemical synthesis of EX-527Citation15.

Scheme 1. Chemical synthesis of EX-527Citation15.

Table 1. In vitro assays of EX-527 and its analogue 35 on isolated recombinant sirtuins expressed in bacteria.

Scheme 2. Spontaneous hydrolysis of the DMF adduct of EX-527.

Scheme 2. Spontaneous hydrolysis of the DMF adduct of EX-527.

Figure 2. (A) Mechanism of sirtuin-catalysed deacetylation of a peptide (or protein) substrate Ac-Pep (acetylated peptide). For simplicity, acidic and basic general catalysis is not represented in this mechanism. (B) Proposed simplified mechanism of sirtuin inhibition by EX-243, adapted from Gertz et al.Citation25. E: enzyme. Note that former studies of SIRT1 inhibition by substrate analogues suggested (i) a random addition of substrates (therefore, Ac-Pep could be added first to the enzyme, not represented here for simplification) and (ii) a departure of the peptide product from the enzyme in the last step (which would disagree here with the existence of the crystallised complex E/2′-O-AcADPr/EX-243)Citation39.

Figure 2. (A) Mechanism of sirtuin-catalysed deacetylation of a peptide (or protein) substrate Ac-Pep (acetylated peptide). For simplicity, acidic and basic general catalysis is not represented in this mechanism. (B) Proposed simplified mechanism of sirtuin inhibition by EX-243, adapted from Gertz et al.Citation25. E: enzyme. Note that former studies of SIRT1 inhibition by substrate analogues suggested (i) a random addition of substrates (therefore, Ac-Pep could be added first to the enzyme, not represented here for simplification) and (ii) a departure of the peptide product from the enzyme in the last step (which would disagree here with the existence of the crystallised complex E/2′-O-AcADPr/EX-243)Citation39.

Table 2. Binding parameters of EX-527 with sirtuins.

Figure 3. Crystal structures of sirtuins in complex with indole inhibitors EX-243 and its analogue (S)-35. Left: SIRT1/NAD+/(S)-35 (4I5I)Citation31; middle: SIRT3/ADPr/EX-243 (4BVB); right: Sir2Tm/2′-O-AcADPr/deacetyl p53 peptide/EX-243 (4BV2)Citation25. Active site close-up representations are displayed below the full structures. Pep: deacetyl p53 peptide.

Figure 3. Crystal structures of sirtuins in complex with indole inhibitors EX-243 and its analogue (S)-35. Left: SIRT1/NAD+/(S)-35 (4I5I)Citation31; middle: SIRT3/ADPr/EX-243 (4BVB); right: Sir2Tm/2′-O-AcADPr/deacetyl p53 peptide/EX-243 (4BV2)Citation25. Active site close-up representations are displayed below the full structures. Pep: deacetyl p53 peptide.

Table 3. Representative examples of cellular effects of EX-527.

Table 4. Selected pharmacokinetics parameters of EX-527 (in plasma).

Table 5. Representative examples of in vivo assays of EX-527.