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The chemistries and consequences of DNA and RNA methylation and demethylation

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Pages 1099-1107 | Received 10 Jan 2017, Accepted 06 Apr 2017, Published online: 30 May 2017

Figures & data

Figure 1. Examples of methylated and oxidized bases found in RNA and DNA.

Figure 1. Examples of methylated and oxidized bases found in RNA and DNA.

Figure 2. Mechanism of methylation leading to the formation of het-CH3 and C-CH3 connectivities in RNA and DNA.

Figure 2. Mechanism of methylation leading to the formation of het-CH3 and C-CH3 connectivities in RNA and DNA.

Figure 3. Oxidation of m6A followed by decomposition of the hemiaminal to A and oxidation if 5mdC to stable 5hmdC.

Figure 3. Oxidation of m6A followed by decomposition of the hemiaminal to A and oxidation if 5mdC to stable 5hmdC.

Figure 4. Potential mechanism of chemically induced active demethylation with a potential immediate re-methylation.

Figure 4. Potential mechanism of chemically induced active demethylation with a potential immediate re-methylation.

Figure 5. Active demethylation via base excision repair. Two possibilities are discussed: A direct removal of 5fdC and 5cadC in xdC:dG base pairs or removal of a deaminated 5hmdU in a 5hmdU:dG mismatch by BER glycosylase.

Figure 5. Active demethylation via base excision repair. Two possibilities are discussed: A direct removal of 5fdC and 5cadC in xdC:dG base pairs or removal of a deaminated 5hmdU in a 5hmdU:dG mismatch by BER glycosylase.