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Research Article

Human parainfluenza 3 and respiratory syncytial viruses detected in pangolins

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Pages 1657-1663 | Received 11 Mar 2022, Accepted 31 May 2022, Published online: 20 Jun 2022

Figures & data

Table 1. General information of the rescued Malayan pangolins.

Figure 1. Overview and abundance of viral species in pangolin lung tissue samples. The darkest colour represents more than 20 reads.

Figure 1. Overview and abundance of viral species in pangolin lung tissue samples. The darkest colour represents more than 20 reads.

Figure 2. High-throughput sequencing coverage plots for eight strains of virus detected in pangolin lung tissue samples.

Figure 2. High-throughput sequencing coverage plots for eight strains of virus detected in pangolin lung tissue samples.

Figure 3. Overview of the genomes of HPIV3 and HRSV identified in pangolin lung tissue samples, and comparison of each complete viral sequence with the highest nucleic acid identity.

Figure 3. Overview of the genomes of HPIV3 and HRSV identified in pangolin lung tissue samples, and comparison of each complete viral sequence with the highest nucleic acid identity.

Figure 4. Phylogenetic trees constructed using the Maximum Likelihood method using the nucleotide sequences of viruses found in pangolins (A) and nucleotide sequences of HRSVB (B).

Figure 4. Phylogenetic trees constructed using the Maximum Likelihood method using the nucleotide sequences of viruses found in pangolins (A) and nucleotide sequences of HRSVB (B).
Supplemental material

Supplemental Material

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Data availability statement

The sequences for this study are available in GenBank under the accession number OM141135-OM141143. The raw data of this study have been deposited in the NGDC (National Genomics Data Center) database with accessions CRA006942.

Acknowledgements

This work was financially supported by a project from Ministry of Science and Technology of China (No. 2020YFC0840805), a start-up funding for Dr. Yi-Gang Tong from Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Guangxi Scientific and Technological Research (GUIKEAB20059002) and Guangxi Medical University Training Program for Distinguished Young Scholars.