The complete mitochondrial genome of Thryssa hamiltonii and phylogenetic analysis of Engraulidae (Clupeiformes; Clupeoidei)

Figures & data

Table 1. Features of the mitochondrial genome of Thryssa hamiltonii.

	Position		Size (bp)	Amino	Codon
Gene	From	To	Nucleotide	acid	Start	Stop	Gap	Strand
tRNA-Phe	1	69	69				0	H
12S rRNA	70	1022	953				0	H
tRNA-Val	1023	1094	72				0	H
16S rRNA	1095	2783	1688				0	H
tRNA-Leu^(^UUA^)	2784	2859	76				0	H
ND1	2860	3834	975	324	ATG	TAA	0	H
tRNA-Ile	3836	3907	72				1	H
tRNA-Gln	3907	3977	71				−1	L
tRNA-Met	3977	4045	69				−1	H
ND2	4046	5090	1045	348	ATG	T–	0	H
tRNA-Trp	5091	5162	72				0	H
tRNA-Ala	5165	5233	69				2	L
tRNA-Asn	5235	5307	73				1	L
tRNA-Cys	5339	5404	66				31	L
tRNA-Tyr	5405	5475	71				0	L
COX1	5477	7021	1545	514	GTG	TAA	1	H
tRNA-Ser^(^UCA^)	7022	7092	71				0	L
tRNA-Asp	7098	7166	69				5	H
COX2	7178	7868	691	230	ATG	T–	11	H
tRNA-Lys	7869	7942	74				0	H
ATP8	7944	8111	168	55	ATG	TAA	1	H
ATP6	8102	8785	684	227	ATG	TAA	−10	H
COX3	8785	9569	785	261	ATG	TA-	−1	H
tRNA-Gly	9570	9641	72				0	H
ND3	9642	9900	349	116	ATG	T–	0	H
tRNA-Arg	9991	10,059	69				0	H
ND4L	10,060	10,356	297	98	ATG	TAA	0	H
ND4	10,350	11,730	1381	460	ATG	T–	−6	H
tRNA-His	11,731	11,799	69				0	H
tRNA-Ser^(^AGC^)	11,801	11,867	67				1	H
tRNA-Leu^(^CUA^)	11,868	11,939	72				0	H
ND5	11,940	13,774	1835	611	ATG	TA-	0	H
ND6	13,771	14,292	522	173	ATG	AGG	−4	L
tRNA-Glu	14,293	14,361	69				0	L
Cyt b	14,366	15,506	1141	380	ATG	T–	4	H
tRNA-Thr	15,507	15,576	70				0	H
tRNA-Pro	15,576	15,647	72				−1	L
D-loop	15,648	16,737	1090				0	H

Figure 1. Phylogenetic analysis of 16 species of family Engraulidae based on their complete mitochondrial genomes, determined using the Neighbour-joining method. Bootstrap support values (1000 replicates) are indicated at the nodes. The number after the species name is the GenBank accession number.