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Mitochondrial DNA Part B
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Volume 3, 2018 - Issue 2
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Mitogenome Announcement

Complete mitochondrial genome of a woolly mammoth (Mammuthus primigenius) from Maly Lyakhovsky Island (New Siberian Islands, Russia) and its phylogenetic assessment

Igor V. KornienkoDepartment of Strategic Research, Southern Scientific Centre, Russian Academy of Sciences, Rostov-on-Don, Russian Federation; ;Laboratory of Biological Objects Identification, Southern Federal University, Rostov-on-Don, Russian Federation;
,
Tatiana G. FaleevaDepartment of Forensic Medicine, Mechnikov North-Western State Medical University, Russian Federation;
,
Natalia V. OreshkovaLaboratory of Forest Genetics and Selection, V. N. Sukachev Institute of Forest, Siberian Branch of Russian Academy of Sciences, Krasnoyarsk, Russian Federation; ;Laboratory of Forest Genomics, Genome Research and Education Center, Siberian Federal University, Krasnoyarsk, Russian Federation;
,
Semyon E. GrigorievInstitute of Applied Ecology of the North, North-Eastern Federal University, Yakutsk, Russian Federation;
,
Lena V. GrigorevaInstitute of Applied Ecology of the North, North-Eastern Federal University, Yakutsk, Russian Federation;
,
Evgeniy P. SimonovLaboratory of Forest Genomics, Genome Research and Education Center, Siberian Federal University, Krasnoyarsk, Russian Federation;
,
Anna I. KolesnikovaLaboratory of Forest Genomics, Genome Research and Education Center, Siberian Federal University, Krasnoyarsk, Russian Federation;
,
Yuliya A. PutintsevaLaboratory of Forest Genomics, Genome Research and Education Center, Siberian Federal University, Krasnoyarsk, Russian Federation;
&
Konstantin V. KrutovskyLaboratory of Forest Genomics, Genome Research and Education Center, Siberian Federal University, Krasnoyarsk, Russian Federation; ;Department of Forest Genetics and Forest Tree Breeding, Georg-August University of Göttingen, Göttingen, Germany; ;Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russian Federation; ;Department of Ecosystem Science and Management, Texas A&M University, College Station, TX, USACorrespondence[email protected]
ORCID Iconhttp://orcid.org/0000-0002-8819-7084
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Pages 596-598 | Received 07 Apr 2018, Accepted 02 May 2018, Published online: 18 May 2018

Figures & data

Figure 1. Maximum likelihood phylogenetic tree of Mammuthus primigenius based on 16,444 bp long alignment of 137 publically available mitogenomes including the studied specimen from Maly Lyakhovsky Island highlighted in bold font. Asian elephant (Elephas maximus) was used as an out-group. The best-fit substitution model TN93 + F + R3 averaged for a whole mitogenomes alignment was chosen according to Bayesian information criterion among 286 tested models in ModelFinder (Kalyaanamoorthy et al. Citation2017). GenBank accession numbers and ultrafast bootstrap values above 70 are presented in the tree.

Figure 1. Maximum likelihood phylogenetic tree of Mammuthus primigenius based on 16,444 bp long alignment of 137 publically available mitogenomes including the studied specimen from Maly Lyakhovsky Island highlighted in bold font. Asian elephant (Elephas maximus) was used as an out-group. The best-fit substitution model TN93 + F + R3 averaged for a whole mitogenomes alignment was chosen according to Bayesian information criterion among 286 tested models in ModelFinder (Kalyaanamoorthy et al. Citation2017). GenBank accession numbers and ultrafast bootstrap values above 70 are presented in the tree.
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Related Research Data

Complete mitochondrial genome and phylogeny of Pleistocene mammoth Mammuthus primigenius
Source: Public Library of Science (PLoS)
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Source: Oxford University Press (OUP)
Complete mitochondrial genome of a woolly mammoth (Mammuthus primigenius) from Maly Lyakhovsky Island (New Siberian Islands, Russia) and its phylogenetic assessment
Source: Taylor & Francis
ModelFinder: fast model selection for accurate phylogenetic estimates
Source: Springer Science and Business Media LLC

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