Characterization of the complete chloroplast genome of Lonicera macranthoides

Figures & data

Figure 1. Neighbor-joining (NJ) tree based on the whole chloroplast genome sequences of 12 taxa including Lonicera macranthoides and one outgroup taxon. The whole chloroplast genome sequences were aligned using MAFFT online version (https://mafft.cbrc.jp/alignment/server/) and subjected to generating NJ phylogenetic tree by MEGA v7.0 (Kumar et al. 2016). The bootstrap support values (>50%) from 1,000 replicates are indicated in the nodes. Chloroplast genome sequences used for this tree are: Lonicera macranthoides, MH579750; Lonicera japonica, KJ170923; Lonicera stephanocarpa, MG738668; Lonicera frangrantissima var. lancifolia, MG738669; Lonicera tragophylla, MG738667; Triosteum pinatifidum, MG738666; Patrinia saniculifolia, MG517444; Dipelta floribunda, MG738670; Kolkwitzia amabilis, KT966716; Weigela florida, MG738664; Sinadoxa corydalifolia, KX258651 (outgroup).

Kumar S, Stecher G, Tamura K. 2016. Mega7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol. 33:1870–1874.

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