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Mitochondrial DNA Part B
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Volume 4, 2019 - Issue 1
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Mitogenome Announcement

The complete chloroplast genome sequence of Seguin chestnut (Castanea seguinii)

Saman ZulfiqarKey Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, ChinaView further author information
,
Xiao-Xiao GaoKey Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, ChinaView further author information
,
Yi-Wei SunKey Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, ChinaView further author information
,
Guo-Jia HuKey Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, ChinaView further author information
,
Feng YanKey Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, ChinaView further author information
,
Meng DangKey Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, ChinaView further author information
&
Peng ZhaoKey Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, ChinaCorrespondence[email protected]
ORCID Iconhttp://orcid.org/0000-0003-3033-6982View further author information
ORCID Icon show all
Pages 342-343 | Received 03 Oct 2018, Accepted 20 Oct 2018, Published online: 08 Jan 2019

Figures & data

Figure 1. Bayesian inference (BI) phylogenetic tree based on 20 complete chloroplast genome sequences. Accession numbers: Castanea mollissima HQ336406, Castanopsis echinocarpa NC_023801, Castanopsis concinna NC_033409, Lithocarpus balansae KP299291, Quercus baronii KT963087, Quercus dolicholepis KU240010, Quercus variabilis KU240009, Quercus aliena KU240007, Quercus aquifolioides NC_026913, Quercus spinosa NC_026907, Trigonobalanus doichangensis NC_023959, Morus mongolica KM491711, Morus alba KU355276, Ficus racemose KT368151, Tetracentron sinense KC608752, Trochodendron aralioides KC608753, Morella rubra NC_035006, Ostrya rehderiana NC_028349, and Corylus chinensis KX814336. The number on each node of branch indicates the bootstrap support value. The bond line marks the newly sequenced C. seguinii in this study.

Figure 1. Bayesian inference (BI) phylogenetic tree based on 20 complete chloroplast genome sequences. Accession numbers: Castanea mollissima HQ336406, Castanopsis echinocarpa NC_023801, Castanopsis concinna NC_033409, Lithocarpus balansae KP299291, Quercus baronii KT963087, Quercus dolicholepis KU240010, Quercus variabilis KU240009, Quercus aliena KU240007, Quercus aquifolioides NC_026913, Quercus spinosa NC_026907, Trigonobalanus doichangensis NC_023959, Morus mongolica KM491711, Morus alba KU355276, Ficus racemose KT368151, Tetracentron sinense KC608752, Trochodendron aralioides KC608753, Morella rubra NC_035006, Ostrya rehderiana NC_028349, and Corylus chinensis KX814336. The number on each node of branch indicates the bootstrap support value. The bond line marks the newly sequenced C. seguinii in this study.

Related Research Data

Castanea spp. biodiversity conservation: collection and characterization of the genetic diversity of an endangered species
Source: Springer Science and Business Media LLC
Automatic annotation of organellar genomes with DOGMA
Source: eScholarship, University of California
Allozyme diversity in Chinese, Seguin and American chestnut (Castanea spp.)
Source: Springer Science and Business Media LLC
Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach
Source: Oxford University Press (OUP)
Complete Plastid Genome Sequences of Three Rosids (Castanea, Prunus, Theobroma): Evidence for At Least Two Independent Transfers of rpl22 to the Nucleus
Source: Oxford University Press (OUP)
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice across a Large Model Space
Source: Oxford University Press (OUP)

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