Complete mitogenomes of five ecologically diverse Australian freshwater fishes

Figures & data

Figure 1. Phylogenetic relationship of five new mitogenomes along with the single closest match for each one derived from BLASTn search. Tip labels include GenBank accession and species name. New mitogenomes highlighted in bold font. Alignment of mitogenomes (excluding 16S, 12S and control region) was performed using MAFFT v7.017 (Katoh et al.2002). A maximum-likelihood phylogenetic analysis was performed on the final alignment of 11,500 bp with RAxML v8.2.11 using the GTR + GAMMA substitution model (Stamatakis 2006).

Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30:3059–3066.

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Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 22:2688–2690.

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