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Mitochondrial DNA Part B
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Volume 4, 2019 - Issue 1
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Mitogenome Announcement

Complete mitochondrial genome of Trinket cattle, a Danish colonial leftover

Arun Kumar DeICAR-Central Island Agricultural Research Institute, Port Blair, India; View further author information
,
Ramachandran MuthiyanGCC Biotech India Pvt. Ltd., Joychandipur, India; View further author information
,
Zachariah GeorgeICAR-Central Island Agricultural Research Institute, Port Blair, India; View further author information
,
Perumal PonrajICAR-Central Island Agricultural Research Institute, Port Blair, India; View further author information
,
Dhruba MalakarNational Dairy Research Institute, Karnal, IndiaView further author information
,
A. KunduICAR-Central Island Agricultural Research Institute, Port Blair, India; View further author information
,
Jai SunderICAR-Central Island Agricultural Research Institute, Port Blair, India; View further author information
&
Debasis BhattacharyaICAR-Central Island Agricultural Research Institute, Port Blair, India; Correspondence[email protected]
View further author information
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Pages 2053-2054 | Received 30 Mar 2019, Accepted 03 May 2019, Published online: 24 May 2019

Figures & data

Figure 1. Phylogenetic analysis of Trinket cattle based on concatenated sequence of PCGs. Phylogenetic relationship between mtDNA sequences of Trinket cattle and other mitogenomes of cattle were analyzed using maximum-likelihood method based on the Hasegawa–Kishino–Yano model (Hasegawa et al. Citation1985). Accession numbers of cattle breeds used are as follows: MK335920 (Trinket), AF492350 (Zwergzebu), KX575711 (Sahiwal), MF667929 (Vechur), MF667930 (Kasargode), MF667931 (Wayanad), NC_005971 (Nelore), AF492351 (Fleckvieh), DQ124414 (Holstein-Fresian), EU177844 (Maremmana), FJ971080 (Romagnola), FJ971081 (Chianina), GU947019 (Argus), GU947021 (Longhorn), JN817300 (Alentejana), JN817306 (Calvana), JN817331 (Limousin), JN817342 (Agerolese), JN817351 (Marchigiana), KJ709685 (Red Mountain), KT184468 (Menofi), and MF925711 (Sanhe).

Figure 1. Phylogenetic analysis of Trinket cattle based on concatenated sequence of PCGs. Phylogenetic relationship between mtDNA sequences of Trinket cattle and other mitogenomes of cattle were analyzed using maximum-likelihood method based on the Hasegawa–Kishino–Yano model (Hasegawa et al. Citation1985). Accession numbers of cattle breeds used are as follows: MK335920 (Trinket), AF492350 (Zwergzebu), KX575711 (Sahiwal), MF667929 (Vechur), MF667930 (Kasargode), MF667931 (Wayanad), NC_005971 (Nelore), AF492351 (Fleckvieh), DQ124414 (Holstein-Fresian), EU177844 (Maremmana), FJ971080 (Romagnola), FJ971081 (Chianina), GU947019 (Argus), GU947021 (Longhorn), JN817300 (Alentejana), JN817306 (Calvana), JN817331 (Limousin), JN817342 (Agerolese), JN817351 (Marchigiana), KJ709685 (Red Mountain), KT184468 (Menofi), and MF925711 (Sanhe).

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