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Mitochondrial DNA Part B
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Volume 4, 2019 - Issue 2
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Mitogenome Announcement

Complete mitochondrial genome sequence of lettuce pathogenic fungus, Fusarium oxysporum f. sp. lactucae 09-002

Jongsun ParkInfoboss Co., Ltd., Seoul, Korea; ;InfoBoss Research Center, Seoul, Korea; ORCID Iconhttp://orcid.org/0000-0003-0786-4701View further author information
ORCID Icon,
Woochan KwonInfoboss Co., Ltd., Seoul, Korea; ;InfoBoss Research Center, Seoul, Korea; ORCID Iconhttp://orcid.org/0000-0001-8665-8097View further author information
ORCID Icon,
Jung-Bun KimDepartment of Agriculture and Life Sciences, Korea National Open University, Seoul, Korea; View further author information
,
Mi-Jeong ParkHorticultural and Herbal Crop Environment Division, National Institute of Horticultural and Herbal Science, Rural Development Administration, Wanju, Korea; View further author information
&
Tae-Sung KimDepartment of Agriculture and Life Sciences, Korea National Open University, Seoul, Korea; Correspondence[email protected]
View further author information
Pages 3434-3436 | Received 07 Aug 2019, Accepted 16 Aug 2019, Published online: 09 Oct 2019

Figures & data

Figure 1. Neighbor joining and maximumlikelihood phylogenetic trees (bootstrap repeat is 10,000 and 1,000, respectively) of 64 Fusarium mitochondrial genomes: F. oxysporum f. sp. lactucae (MN259515 in this study), F. oxysporum (NC_017930, AY874423, AY945289, MF155191, LT906306, LT906349, LT906355, LT906358, LT906357, and LT906345), F. oxysporum f. sp. melonis (LT906328, LT906329, LT906330, LT906325, LT906326, LT906327, LT906331, LT906332, LT906333, and LT906353), F. oxysporum f. sp. pisi (LT906354), F. oxysporum f. sp. vasinfectum (LT906351), F. oxysporum f. sp. raphanin (LT906356), F. oxysporum f. sp. cubense race 1 (LT906350), F. oxysporum f. sp. cubense race 4 (LT906347), F. oxysporum f. sp. niveum (LT906334, LT906338, LT906335, LT906336, LT906340, LT906341, LT906339, and LT906337), F. oxysporum f. sp. cucumerinum (LT906315, LT906314, LT906310, LT906307, LT906308, LT906309, LT906311, LT906312, and LT906313), F. oxysporum f. sp. radicis-lycopersici (LT906352, LT906342, LT906343, LT906344, LT906302, LT906305, LT906319, LT906301, LT906303, LT906304, LT906316, LT906317, LT906318, LT906320, LT906321, LT906322, LT906323, and LT906324), F. oxysporum f. sp. vasinfectum (LT906346), F. commune (LT906348 and NC_036106), and F. graminearum (NC_009493) as an outgroup. Phylogenetic tree was drawn based on neighborjoining tree. Numbers on branches indicate bootstrap values of neighbor joining and maximum likelihood phylogenetic trees, respectively.

Figure 1. Neighbor joining and maximumlikelihood phylogenetic trees (bootstrap repeat is 10,000 and 1,000, respectively) of 64 Fusarium mitochondrial genomes: F. oxysporum f. sp. lactucae (MN259515 in this study), F. oxysporum (NC_017930, AY874423, AY945289, MF155191, LT906306, LT906349, LT906355, LT906358, LT906357, and LT906345), F. oxysporum f. sp. melonis (LT906328, LT906329, LT906330, LT906325, LT906326, LT906327, LT906331, LT906332, LT906333, and LT906353), F. oxysporum f. sp. pisi (LT906354), F. oxysporum f. sp. vasinfectum (LT906351), F. oxysporum f. sp. raphanin (LT906356), F. oxysporum f. sp. cubense race 1 (LT906350), F. oxysporum f. sp. cubense race 4 (LT906347), F. oxysporum f. sp. niveum (LT906334, LT906338, LT906335, LT906336, LT906340, LT906341, LT906339, and LT906337), F. oxysporum f. sp. cucumerinum (LT906315, LT906314, LT906310, LT906307, LT906308, LT906309, LT906311, LT906312, and LT906313), F. oxysporum f. sp. radicis-lycopersici (LT906352, LT906342, LT906343, LT906344, LT906302, LT906305, LT906319, LT906301, LT906303, LT906304, LT906316, LT906317, LT906318, LT906320, LT906321, LT906322, LT906323, and LT906324), F. oxysporum f. sp. vasinfectum (LT906346), F. commune (LT906348 and NC_036106), and F. graminearum (NC_009493) as an outgroup. Phylogenetic tree was drawn based on neighborjoining tree. Numbers on branches indicate bootstrap values of neighbor joining and maximum likelihood phylogenetic trees, respectively.

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