Figures & data
Figure 1. ML phylogenetic tree of D. stramonium with 13 species was constructed by chloroplast sequence. Numbers in the nodes are bootstrap values from 1000 replicates. Arabidopsis thaliana was set as outgroup. NCBI accession of each chloroplast genome is indicated within the parenthesis.
Data availability statement
The workflow, commands, chloroplast genome annotation and the complete chloroplast genomes in Fasta file can be consulted in the GitHub repository; https://github.com/icruz1989/ChloroplastofDaturastramonium. The complete chloroplast genomes used for the phylogenetic analysis were retrieved from NCBI; Arabidopsis thaliana (NC_000932.1), Nicotiana attenuata (MF577082.1), Nicotiana sylvestris (NC_007500.1), Datura stramonium (NC_018117.1), Datura stramonium Ticumán (MT610896), Datura stramonium Teotihuacán (MT610897), Capsicum lycianthoides (NC_026551.1), Capsicum annuum (NC_018552.1), Capsicum chinense (NC_030543.1), Solanum tuberosum (NC_008096.2), Solanum pennellii (NC_HG975452.1), Solanum pimpinellifolium (NC_026882.1), Solanum lycopersicum (NC_AM087200.3).