The complete mitochondrial genome of the common strain black carp (Cyprinus carpio var. baisenensis)

Figures & data

Table 1. Mitochondrial genome characteristics of Cyprinus carpio var.baisenensis.

	Position			Codon
Genes	From	To	Size of nucleotide (bp)	Start	Stop	Amino acid	Anti-codon	Intergenic nucleotide	Strand
tRNA^Phe	1	69	69	–	–	–	GAA	0	D
rRNA	70	1022	953	CAA	AAA	316	–	0	D
tRNA^Val	1025	1096	72	–	–	–	TAC	0	D
rRNA	1119	2751	1633	TTA	AAT	543	–	0	D
tRNA^Leu	2776	2851	76	–	–	–	TAA	0	D
NAD1	2853	3827	975	ATG	TAA	324	–	4	D
tRNA^Ile	3832	3903	72	–	–	–	GAT	–2	D
tRNA^Gln	3902	3972	71	–	–	–	TTG	1	R
tRNA^Met	3975	4043	69	–	–	–	CAT	0	D
NAD2	4044	5090	1047	ATG	TAG	348	–	0	D
tRNA^Trp	5089	5159	71	–	–	–	TCA	2	D
tRNA^Ala	5162	5230	69	–	–	–	TGC	1	R
tRNA^Asn	5232	5304	73	–	–	–	GTT	0	R
OL	5307	5338	32	TTT	AAA	28	–	–2	D
tRNA^Cys	5338	5404	67	–	–	–	GCA	1	R
tRNA^Tyr	5404	5474	71	–	–	–	GTA	1	R
COX1	5476	7026	1551	GTG	TAA	516	–	0	D
tRNA^Ser	7027	7097	71	–	–	–	TGA	3	R
tRNA^Asp	7101	77172	72	–	–	–	GTC	13	D
COX2	7186	77876	691	ATG	CCT	229	–	0	D
tRNA ^Lys	7877	7952	76	–	–	–	TTT	1	D
ATP8	7954	8118	165	ATG	TAG	54	–	–7	D
ATP6	8112	8795	684	ATG	TAA	227	–	–1	D
COX3	8795	9580	786	ATG	TAA	261	–	0	D
tRNA^Gly	9580	9651	72	–	–	–	TCC	0	D
NAD3	9652	10,002	351	ATG	TAG	116	–	0	D
tRNA^Arg	10,001	10,070	70	–	–	–	TCG	0	D
NAD4L	10,071	10,367	297	ATG	TAA	98	–	–7	D
NAD4	10,361	11,741	1381	ATG	ATT	459	–	0	D
tRNA^His	11,742	11,810	69	–	–	–	GTG	–1	D
tRNA^Ser	11,811	11,879	69	–	–	–	GCT	2	D
tRNA^Leu	11,881	11,953	73	–	–	–	TAG	3	D
NAD5	11,957	13,780	1824	ATG	TAA	607	–	–4	D
NAD6	13,777	14,298	522	ATG	TAA	173	–	0	R
tRNA^Glu	14,299	14,367	69	–	–	–	TTC	4	R
COB	14,373	15,513	1141	ATG	CTT	379	–	0	D
tRNA^Thr	15,514	15,585	72	–	–	–	TGT	–1	D
tRNA^Pro	15,585	15,654	70	–	–	–	TGG	0	R
D loop	15,673	16,478	806	–	–	–	–	0	D

Figure 1. (a) The maximum likelihood (ML) phylogenetic tree of Cyprinus carpio var.baisenensis and related species. Numbers on each node are bootstrap probability. The number after the species name is the GenBank accession number.

Availability of data and materials

The genome sequence data that support the findings of (Complete Mitochondrial Genomes (mtDNA) of Common Strain Black Carp (Cyprinus carpio var.baisenensis) are openly available in GenBank of NCBI at (https://www.ncbi.nlm.nih.gov/) under the accession no. MT780875. The associated Bio-Project, SRR, SRP and Bio-Sample numbers are PRJNA674914, SRR12996635, SRP 291369, and SAMN16679851 respectively.