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Mitogenome Announcement

Complete mitochondrial DNA sequence of the Japanese endemic catfish Silurus biwaensis (Siluriformes: Siluridae) from Lake Biwa

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Pages 2482-2483 | Received 17 Aug 2020, Accepted 18 Apr 2021, Published online: 09 Aug 2021

Figures & data

Figure 1. Phylogenetic relationships (maximum likelihood) of the Siluridae based on the nucleotide sequences of the 13 protein-coding genes of the mitochondrial genome. Sequences from Kryptopterus bicirrhis and Ompok bimaculatus were used as an outgroups. These sequences were separated by codon positions, and for each partition, the optimal models of sequence evolution were used in the maximum likelihood method using MEGA X, based on the corrected Akaike information criterion. The numbers at the nodes indicate the bootstrap support inferred from 1000 bootstrap replicates. Alphanumeric terms indicate the DNA Database of Japan accession numbers.

Figure 1. Phylogenetic relationships (maximum likelihood) of the Siluridae based on the nucleotide sequences of the 13 protein-coding genes of the mitochondrial genome. Sequences from Kryptopterus bicirrhis and Ompok bimaculatus were used as an outgroups. These sequences were separated by codon positions, and for each partition, the optimal models of sequence evolution were used in the maximum likelihood method using MEGA X, based on the corrected Akaike information criterion. The numbers at the nodes indicate the bootstrap support inferred from 1000 bootstrap replicates. Alphanumeric terms indicate the DNA Database of Japan accession numbers.

Data availability statement

The genome sequence data that support the findings of this study are openly available in DDBJ/GenBank at (https://www.ddbj.nig.ac.jp/index.html) under accession no. LC574781. The associated BioProject ID, BioSample ID, and SRA (DRA) Accession no. are PRJDB11311, SAMD00283357, and DRA011642, respectively.