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Plastome Report

Complete chloroplast genome of sageretia thea (rhamnaceae), an ornamental fruit and medicinal tree

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Pages 376-380 | Received 21 Dec 2023, Accepted 07 Mar 2024, Published online: 26 Mar 2024

Figures & data

Figure 1. The reference image of the plant of sageretia thea(taken by misha zhan, photographed in the Mountain slope regions of the Zhejiang province, China; the most characteristic feature of the specimen: Rattan shrub, leaves subopposite or alternate, elliptic, margin serrate).

Figure 1. The reference image of the plant of sageretia thea(taken by misha zhan, photographed in the Mountain slope regions of the Zhejiang province, China; the most characteristic feature of the specimen: Rattan shrub, leaves subopposite or alternate, elliptic, margin serrate).

Figure 2. Gene map of the sageretia thea cp genome. The four areas (SSC, LSC, IRA and IRB) had been noted in black coil. Genes reside in the inside and outside of the outer circle are in the forward and reverse directions, respectively. The dark and light gray bars in the inner circle denote G + C and a + T contents, respectively.

Figure 2. Gene map of the sageretia thea cp genome. The four areas (SSC, LSC, IRA and IRB) had been noted in black coil. Genes reside in the inside and outside of the outer circle are in the forward and reverse directions, respectively. The dark and light gray bars in the inner circle denote G + C and a + T contents, respectively.

Figure 3. Phylogenetic tree of 26 species of rhamnaceae family based on complete chloroplast genomes. Two taxa (vitis davidii and vitis amurensis) as outgroups. The species are: Sageretia thea (OR039202), berchemia berchemiifolia (NC_037477; Cheon et al. Citation2018), berchemiella wilsonii (NC_043912; Li et al. Citation2019), rhamnella wilsonii (NC_066091), berchemia flavescens (MK460212; zhu et al. 2019), berchemia polyphylla (NC_072275), berchemia racemosa (NC_066653), rhamnus crenata (LC635131), rhamnus globosa (NC_057506; Xie et al. Citation2020), rhamnus cathartica (NC_068507), rhamnus heterophylla (NC_057481; Li et al. Citation2020), rhamnus taquetii (NC_045855; jin et al. 2020), ventilago harmandiana (NC_065258), ventilago leiocarpa (NC_053785), hovenia trichocarpa (NC_052875; Li et al. Citation2020), hovenia dulcis (MT225403; Li et al. Citation2020), hovenia acerba (NC_052853; Zhang et al. Citation2020), paliurus hemsleyanus (NC_070046), ziziphus spina-christi (NC_037152), ziziphus mauritiana (NC_037151), ziziphus incurva (NC_050251), ziziphus mairei (NC_069299), ziziphus hajarensis (MZ475300), ziziphus jujuba (NC_030299; Ma et al. Citation2017), ziziphus jujuba cultivar bokjo (MW381780), berchemia lineata (NC_051560; Xie et al. Citation2020), vitis davidii (NC_057166; Tian et al. Citation2019), vitis amurensis(MT479164; Guo et al. Citation2020).

Figure 3. Phylogenetic tree of 26 species of rhamnaceae family based on complete chloroplast genomes. Two taxa (vitis davidii and vitis amurensis) as outgroups. The species are: Sageretia thea (OR039202), berchemia berchemiifolia (NC_037477; Cheon et al. Citation2018), berchemiella wilsonii (NC_043912; Li et al. Citation2019), rhamnella wilsonii (NC_066091), berchemia flavescens (MK460212; zhu et al. 2019), berchemia polyphylla (NC_072275), berchemia racemosa (NC_066653), rhamnus crenata (LC635131), rhamnus globosa (NC_057506; Xie et al. Citation2020), rhamnus cathartica (NC_068507), rhamnus heterophylla (NC_057481; Li et al. Citation2020), rhamnus taquetii (NC_045855; jin et al. 2020), ventilago harmandiana (NC_065258), ventilago leiocarpa (NC_053785), hovenia trichocarpa (NC_052875; Li et al. Citation2020), hovenia dulcis (MT225403; Li et al. Citation2020), hovenia acerba (NC_052853; Zhang et al. Citation2020), paliurus hemsleyanus (NC_070046), ziziphus spina-christi (NC_037152), ziziphus mauritiana (NC_037151), ziziphus incurva (NC_050251), ziziphus mairei (NC_069299), ziziphus hajarensis (MZ475300), ziziphus jujuba (NC_030299; Ma et al. Citation2017), ziziphus jujuba cultivar bokjo (MW381780), berchemia lineata (NC_051560; Xie et al. Citation2020), vitis davidii (NC_057166; Tian et al. Citation2019), vitis amurensis(MT479164; Guo et al. Citation2020).
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Data availability statement

The genome sequence data that support the findings of this study are openly available in GenBank of NCBI at [https://www.ncbi.nlm.nih.gov] under the accession number of OR039202. The associated BioProject, SRA, and Bio-Sample numbers are PRJNA983071, SRR24916185, and SAMN35719156.