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Original Research

LXR/RXR pathway signaling associated with triple-negative breast cancer in African American women

, , , , , , , , & show all
Pages 1-12 | Published online: 20 Dec 2018

Figures & data

Table 1 Patients’ characteristics

Figure 1 Representative 2-DE gel images of protein profiles of invasive breast carcinoma.

Notes: (A) TNBC vs LA in African American women, (B) African American vs European American women breast cancer samples, (C) TNBC in African American vs European American women, (D) TNBC vs LA in European American women, (E) TNBC vs LA regardless of race, and (F) LA in African American women vs LA in European American women. Proteins were separated by IEF as the first dimension, using 24 cm tube gels (pH 4–8), and linear gradient gel (11–19%) as the second dimension. The protein spots were cut from the gel, tryptically digested, and identified via MALDI–MS. Significantly expressed spots are posted in along with their individual PDQuest spot number assignment and other data.
Abbreviations: DE, 2-dimensional gel electrophoresis; LA, luminal A; MALDI-MS, matrix assisted laser desorption/ionisation - mass spectrometry; TNBC, triple-negative breast cancer.
Figure 1 Representative 2-DE gel images of protein profiles of invasive breast carcinoma.

Figure 2 Differentially expressed proteins in breast cancer tissues from AA compared to European women regardless of hormonal status.

Note: Selected area of the spots showing intensity differences between AA breast and Caucasian women breast tissues was amplified and is indicated by circles.
Abbreviations: AA, African American; EA, European American;
Figure 2 Differentially expressed proteins in breast cancer tissues from AA compared to European women regardless of hormonal status.

Figure 3 Differentially expressed proteins in (A) Luminal A breast cancer vs TNBC in AA women, (B) LA vs TNBC in European American women, and (C) TNBC in AA women vs TNBC in European American women.

Abbreviations: AA, African American; EA, European American; ER, estrogen receptors; LA, luminal A; TNBC, triple-negative breast cancer.
Figure 3 Differentially expressed proteins in (A) Luminal A breast cancer vs TNBC in AA women, (B) LA vs TNBC in European American women, and (C) TNBC in AA women vs TNBC in European American women.

Figure 4 IPA of canonical pathways of differentially altered protein expressed in breast carcinoma (A) LA vs TNBC in African American women; (B) LA vs TNBC in European American women; (C) TNBC in African American women vs TNBC in European American women.

Abbreviations: IPA, ingenuity pathway analysis; LA, luminal A; TNBC, triple-negative breast cancer.
Figure 4 IPA of canonical pathways of differentially altered protein expressed in breast carcinoma (A) LA vs TNBC in African American women; (B) LA vs TNBC in European American women; (C) TNBC in African American women vs TNBC in European American women.

Figure 5 Western blot (A and E) and immunohistochemistry (C) validation of selected shown proteins. Bar graph of the Western blotting assay of all proteins (B) and CYP7B1 (F). Stain intensity of IHC for each protein tested is shown in (D). Each bar represents the relative value of the protein relative to β-actin. For each data point, samples were tested in triplicate; the graph represents the mean ± SD. Asterisks denote significance: *significant at 0.05 and **significant at <0.005.

Abbreviations: LA, luminal A; TNBC, triple-negative breast cancer.
Figure 5 Western blot (A and E) and immunohistochemistry (C) validation of selected shown proteins. Bar graph of the Western blotting assay of all proteins (B) and CYP7B1 (F). Stain intensity of IHC for each protein tested is shown in (D). Each bar represents the relative value of the protein relative to β-actin. For each data point, samples were tested in triplicate; the graph represents the mean ± SD. Asterisks denote significance: *significant at 0.05 and **significant at <0.005.

Table 2 Proteins altered in expression between TNBC and LA in African American and European American women