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Original Research

Germline BRCA1 and BRCA2 deleterious mutations and variants of unknown clinical significance associated with breast/ovarian cancer: a report from North India

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Pages 6505-6516 | Published online: 30 Nov 2018

Figures & data

Table 1 Baseline characteristics of the study group (n=206)

Table 2 BRCA1 germline mutations in the breast and/or ovarian cancer group

Figure 1 Mutational spectrum of BRCA genes in the breast and/or ovarian cancer group.

Notes: Pie chart depicting (A) exonic distribution of the distinct BRCA1 mutations (an=31). (B) Number of different types of Class 5, Class 4 and Class 3 mutations observed in BRCA1 gene (n=33). (C) Exonic distribution of distinct BRCA2 mutations (n=16). (D) Number of different types of Class 5, Class 4 and Class 3 mutations observed in BRCA2 gene (n=16). (E) Bar graph comparing the number of different Class 4/5 mutations observed in BRCA1/BRCA2 genes (n=36). aDuplication (exons 21–23) and one intronic mutation have been excluded from the pie diagram.

Figure 1 Mutational spectrum of BRCA genes in the breast and/or ovarian cancer group.Notes: Pie chart depicting (A) exonic distribution of the distinct BRCA1 mutations (an=31). (B) Number of different types of Class 5, Class 4 and Class 3 mutations observed in BRCA1 gene (n=33). (C) Exonic distribution of distinct BRCA2 mutations (n=16). (D) Number of different types of Class 5, Class 4 and Class 3 mutations observed in BRCA2 gene (n=16). (E) Bar graph comparing the number of different Class 4/5 mutations observed in BRCA1/BRCA2 genes (n=36). aDuplication (exons 21–23) and one intronic mutation have been excluded from the pie diagram.

Table 3 BRCA2 germline mutations in the breast/ovarian cancer patients

Figure 2 Novel BRCA1/BRCA2 mutations identified in the cohort.

Notes: Lollipop plots showing the distribution of germline mutations in (A) BRCA1 and (B) BRCA2 genes. Predicted amino acid change has been represented for each mutation. The plots were generated using the online tool MutationMapper – cBioPortal for Cancer GenomicsCitation31,Citation32 (GenBank Reference BRCA1: NM_007300 and GenBank Reference BRCA2: NM_000059).

Figure 2 Novel BRCA1/BRCA2 mutations identified in the cohort.Notes: Lollipop plots showing the distribution of germline mutations in (A) BRCA1 and (B) BRCA2 genes. Predicted amino acid change has been represented for each mutation. The plots were generated using the online tool MutationMapper – cBioPortal for Cancer GenomicsCitation31,Citation32 (GenBank Reference BRCA1: NM_007300 and GenBank Reference BRCA2: NM_000059).

Table 4 Recurrent BRCA1/BRCA2 gene mutations observed in the study cohort

Table 5 Correlation between BRCA mutation status and prognostic markers/tumor histopathology