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Original Article

Identification of key constituents in volatile oil of Ligusticum chuanxiong based on data mining approaches

, , , , , & show all
Pages 445-455 | Received 23 Mar 2010, Accepted 08 Sep 2010, Published online: 19 Apr 2011

Figures & data

Figure 1.  Illustration of the strategy presented in this article.

Figure 1.  Illustration of the strategy presented in this article.

Table 1.  Blood vessel relaxation (BVR) of nine volatile oils.

Figure 2.  Concentration–activity curves of nine Ligusticum chuanxiong Hort in producing areas.

Figure 2.  Concentration–activity curves of nine Ligusticum chuanxiong Hort in producing areas.

Table 2.  Fifty-seven common constituents identified in volatile oil of Ligusticum chuanxiong Hort from nine regions.

Figure 3.  Total ionic chromatographic fingerprints of the volatile oil of ten Ligusticum chuanxiong Hort.

Figure 3.  Total ionic chromatographic fingerprints of the volatile oil of ten Ligusticum chuanxiong Hort.

Table 3.  By using Pearson correlation and P < 0.05, 13 chemical constituents (CCS) were selected to have linear association with bioactivity.

Table 4.  The 13 bioactivity-oriented chemical constituents (CCS) were selected by data mining method.

Figure 4.  The selection process of two data mining methods.

Figure 4.  The selection process of two data mining methods.

Figure 5.  The selected 13 chemical constituents keep chemically consistent in different volatile oils of Ligusticum chuanxiong Hort. The chemical characteristics of them are similar. Total concentration accounts for >80% in each volatile oil.

Figure 5.  The selected 13 chemical constituents keep chemically consistent in different volatile oils of Ligusticum chuanxiong Hort. The chemical characteristics of them are similar. Total concentration accounts for >80% in each volatile oil.

Table 5.  By using data mining methods, three patterns can be discovered in the combinations of chemical constituents.

Table 6.  The content of discovered 13 chemical constituents (CCS) in volatile oil test sample and their average.

Table 7.  Regression equations by LARS and LASSO in each concentration.

Table 8.  The comparison of two algorithms: LARS and LASSO in predicting activity of Ligusticum chuanxiong Hort.

Figure 6.  The content of discovered 13 chemical constituents in volatile oil test sample and their average.

Figure 6.  The content of discovered 13 chemical constituents in volatile oil test sample and their average.

Figure 7.  The prediction results given by LARS and LASSO were approximately the same as actual activities.

Figure 7.  The prediction results given by LARS and LASSO were approximately the same as actual activities.

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