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Research Article

Biotransformation studies of prednisone using human intestinal bacteria Part II: Anaerobic incubation and docking studies

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Pages 1211-1219 | Received 28 Nov 2008, Accepted 20 Jan 2009, Published online: 16 Nov 2009

Figures & data

Figure 1. Separation of prednisone metabolites (3–9) after anaerobic incubation with human intestinal bacteria (HIB).

Figure 1.  Separation of prednisone metabolites (3–9) after anaerobic incubation with human intestinal bacteria (HIB).

Table 1. 13C-NMR assignments of prednisone 1 and its anaerobic metabolites 3–9.

Figure 2. Chemical structures of prednisone 1, testosterone 2, and HIB metabolites of 1 (3–9).

Figure 2.  Chemical structures of prednisone 1, testosterone 2, and HIB metabolites of 1 (3–9).

Figure 3. The steroid-binding site of PGE2 9-ketoreductase. Structures of PGE2 9-KR (taken from PGE2 9-KR, NAD,·testosterone complex, light gray). Residues that contact the steroid ligands such as Phe 54, Tyr 55, His 117, Phe 118, Ile 129, Val 306, and Phe 310 are shown in stick representation.

Figure 3.  The steroid-binding site of PGE2 9-ketoreductase. Structures of PGE2 9-KR (taken from PGE2 9-KR, NAD,·testosterone complex, light gray). Residues that contact the steroid ligands such as Phe 54, Tyr 55, His 117, Phe 118, Ile 129, Val 306, and Phe 310 are shown in stick representation.

Figure 4. Docking of metabolite 4 (yellow stick) in the active site of PGE2 9-KR. Hydrogen atoms of the amino acid residues have been removed to improve clarity.

Figure 4.  Docking of metabolite 4 (yellow stick) in the active site of PGE2 9-KR. Hydrogen atoms of the amino acid residues have been removed to improve clarity.

Figure 5. Docking of metabolite (yellow stick) in the active site of PGE2 9-KR. Hydrogen atoms of the amino acid residues have been removed to improve clarity.

Figure 5.  Docking of metabolite 8β (yellow stick) in the active site of PGE2 9-KR. Hydrogen atoms of the amino acid residues have been removed to improve clarity.

Figure 6. Docking of metabolite (yellow stick) in the active site of PGE2 9-KR. Hydrogen atoms of the amino acid residues have been removed to improve clarity

Figure 6.  Docking of metabolite 8α (yellow stick) in the active site of PGE2 9-KR. Hydrogen atoms of the amino acid residues have been removed to improve clarity

Table 2. Results of PASS predicted potential and molecular modeling of prednisone metabolites (3–9).

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