940
Views
24
CrossRef citations to date
0
Altmetric
Article Addendum

To transform or not to transform

That is the dilemma in the statistical analysis of plant volatiles

&
Pages 113-116 | Received 13 Nov 2010, Accepted 13 Nov 2010, Published online: 01 Jan 2011

Figures & data

Figure 1 Literature survey using Google Scholar from 1986–2010 to retrieve publications in chemical ecology which transformed their proportion data as recommended by Aitchison in the fields of plant volatile (or) insect cuticular hydrocarbon analysis. The number of publications citing both the Aitchison transformation and Breiman's Random Forests is also shown.

Figure 1 Literature survey using Google Scholar from 1986–2010 to retrieve publications in chemical ecology which transformed their proportion data as recommended by Aitchison in the fields of plant volatile (or) insect cuticular hydrocarbon analysis. The number of publications citing both the Aitchison transformation and Breiman's Random Forests is also shown.

Figure 2 Unsupervised classification of fruit-dispersal volatile organic compounds (VOCs) of three sympatric Ficus species using proportional abundance of VOCs. (A) A PCA plot of VOC proportions after transformation employing the clr (centered log ratio) method as recommended by Aitchison. (B) An MDS plot of the untransformed proportions of the same VOCs using Random Forests.

Figure 2 Unsupervised classification of fruit-dispersal volatile organic compounds (VOCs) of three sympatric Ficus species using proportional abundance of VOCs. (A) A PCA plot of VOC proportions after transformation employing the clr (centered log ratio) method as recommended by Aitchison. (B) An MDS plot of the untransformed proportions of the same VOCs using Random Forests.

Table 1 Comparison of results from Random Forests on ripe fig fruit volatile organic compounds (VOCs) using untransformed and transformed data

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.