Archaeal Diversity and Spatial Distribution in the Surface Sediment of the South China Sea

Abstract

Archaea represent a significant portion of biomass in the marine sediments and may play an important role in global carbon cycle. However, the identity and composition of deep sea sediment Archaea are unclear. Here, we used the archaeal 16S rRNA gene primers to determine the diversity and community structure of Archaea from shallow water (<100 m) and deep water (>1500 m) sediments in the South China Sea. Phylogenetically the archaeal community is separated between the shallow- and deep sea sediments, with the former being dominated by the Thaumarchaeota and the latter by the Marine Benthic Group B, E and the South African GoldMine Euryarchaeotal Group as well as Thaumarchaeota. Sand content showed significant correlation with Thaumarchaeota, suggesting that the porous media may create an oxic environment that allowed these aerobic organisms to thrive in the surface sediments. The carbon isotope composition of total organic carbon was significantly correlated to the distribution of archaeal groups, suggesting that Archaea overall may be constrained by the availability or sources of organic carbon in the sediments of the South China Sea.

Keywords:

• Archaea
• deep sea sediments
• South China Sea

Acknowledgments

We thank the crew on the MD-147-MARCO POLO cruise of the R/V Marion Dufresne of the French Polar Institute (IPEV). This work is financially supported by National Science Foundation of China (41276125), the South China Sea-Deep program of the National Science Foundation of China (91028005), the “1000 Talents Program” and the State Key Laboratory of Marine Geology, Tongji University (No. MGK 120202).