Smoothing fertility trends in agricultural field experiments

Abstract

Fertility trend within blocks and local variations are the major obstacles to estimate cultivar contrasts in agricultural field trials. This paper examines methods of smoothing fertility trends in field trials using the P-spline. We begin by smoothing trend within block and for each block, and proceeds to demonstrate how it can be extended to smooth trends in trials with two-dimensional setting. We propose simultaneous modelling of trends and local variation. We use Papadakis [J.S. Papadakis, Comparison de differentes methds d'expermentation phytotechnique, Rev. Argen. Agronom. 7 (1940), pp. 297–362.] and kriged covariate to model local variation. We emphasize on the benefit of using P-spline to compromise between parametric and non-parametric approaches. Data sets from wheat and barley trials, designed as randomized complete block design and row-column, are analyzed. We set out a simple strategy of choosing between additive model and two-dimensional setting. We explore different estimation methods and offer some generalizations. The results show importance of the P-spline in modelling trend and the need to choose between additive and two-dimensional settings.

Keywords:

• additive model
• bootstrap F
• mixed model
• Papadakis covariate
• P-spline smoothing
• spatial variation

Acknowledgements

Girma Taye was supported by Ethiopian Agricultural Research Organization. We thank Iain Currie for useful discussions and references.