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Original Articles

Sampling Performance for Bioaerosols by Flow Cytometry with Fluorochrome

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Pages 231-237 | Received 28 Oct 2003, Accepted 13 Jan 2005, Published online: 26 Mar 2010

Although culture-based analysis remains the primary method for environmental bioaerosol analysis, for better understanding and quantifying of bioaerosols both culture- and nonculture-based methods should be used and compared. Here, flow cytometry with fluorochrome (FCM/FL) was applied to evaluate the sampling performance of impingement (AGI-30 all-glass impinger) and filtration (track-etched polycarbonate filter) with different types of fluorescent dye staining (cell membrane integrity and metabolism) and then compared with a traditional culture method (culturability). Two bacterial aerosols (Escherichia coli and endospores of Bacillus subtilis) and two fungal aerosols (Candida famata and Penicillium citrinum spores) were studied. The bioaerosol viability during the sampling processes was highly influenced by bioaerosol characteristics (hardy or fragile), as well as by the fluorescent dyes with different physiological mechanisms. For better viability of the sampled bioaerosol, the impinger was superior to the filter. Moreover, it was found that sampling stress from filtration had more influence on the bioaerosol metabolism mechanism than cell membrane integrity. Furthermore, the differences between cell membrane integrity and the metabolism by sampling stress were found to be related to the bioaerosol species.

INTRODUCTION

Bioaerosols are associated with respiratory and other related health disorders. Currently, infectious indoor agents (e.g., Legionella spp., Mycobacterium tuberculosis, and Staphylococcus spp.), indoor allergens (e.g., Penicillium spp., Alternaria spp., Bacillus subtilis, Bacillus cereus, and Actinomyces spp.), and invasive fungal agents (e.g., Aspergillus fumigatus) can be sampled and quantified by numerous combinations of sampling and analytical techniques. Although samplers for bioaerosols are similar in design to general aerosol samplers, the ability of bioaerosol samplers to preserve the viability (including culturability) of airborne microorganisms is an additional vital factor that must be evaluated (CitationHenningson and Ahlberg 1994).

Bioaerosols consist of both viable and nonviable microbes. Viability can be assessed by various methods, although the culture method is typically used. Many microorganisms, however, do not grow under the standard culture conditions used in laboratories (CitationWong et al. 2004). Resuscitation of microorganisms, such as Virio vulnificus, from a viable but nonculturable (VBNC) state to an infectious state has been demonstrated (CitationOliver and Bockian 1995; CitationOliver et al. 1995). Furthermore, the plate count method generally yields poor precision and requires long incubation times (CitationHenningson et al. 1998). Methods that do not require culturing could help detect and quantify VBNC bacteria in air samples and improve the accuracy of bioaerosol exposure assessment.

The most commonly used methods for quantifying airborne bacteria involve the capture of microorganisms directly on solid media, as with an Andersen sampler; in liquid buffer, as with all-glass impingers (AGI); or through a filter. Because the culture method remains the dominant analytical method for bioaerosol measurements, many studies have investigated sampling efficiency using culturability and the preservation of culturability measurements as a function of the composition of the collection medium. Few studies, however, have evaluated the sampling efficiency in terms of viability. Nonculture-based methods, such as epifluorescence microscopy (EFM), have recently been compared with culture-based methods for bioaerosol concentration assessment. Culture techniques tend to underestimate bacterial concentrations by two orders of magnitude (CitationHeidelberg et al. 1997). Procedures that do not require plate counting are therefore needed to characterize bioaerosol samplers.

Microscopic analysis using stains can be used to evaluate the viability of bacterial cells, even those cells that have lost the ability to produce colonies on standard microbiological culture media (CitationHenningson et al. 1998). Flow cytometry (FCM) is useful for the rapid identification and quantification of bacteria in both aquatic and air environments (CitationDay et al. 2002; CitationLange et al. 1997; Monfort and Baleux 1992; CitationSincock et al. 1999). When used with a variety of dye stains, FCM could also provide a much more rapid and accurate viability assay than EFM (Button et al. 2001; Deleo et al. 1996; Gérald Grégori et al. 2001; Henningsen et al. 1997; Lopez-Amoros et al. 1995; Sieracki et al. 1999).

Our group has successfully established FCM with fluorochrome (FCM/FL) for quick and accurate determination and quantification of total concentrations and viability of bioaerosols. We have applied the optimal conditions of FCM/FL for bacterial and fungal aerosols of laboratory samples (pure and mixture suspension) and environmental field samples (both the air and water samples from the aeration tank of hospital wastewater treatment plant). For an indicator of total cell concentration, acrodine orange (AO) was believed to be reliable due to its high staining efficiency. For a viability indicator, propidium iodide (PI), a membrane-integrity dye, failed to distinguish the endospores of B. subtilis due to overlapping of viable and nonviable regions, whereas quinolinium, 4-[(3-methyl-2(3H)-benzoxazolylidene) methyl]-1- [3 (trimethy-lam-monio) propyl]-, diiodide (YOPRO-1), another membrane-integrity dye, clearly distinguished the regions of viable and nonviable cells. For a metabolic activity indicator, 5-Cyano-2, 3-ditolytetrazolium chloride (CTC) was evaluated. Ourfindings demonstrated that the FCM/FL method can provide reliable information for bioaerosol evaluation by determining viability based on membrane integrity and metabolism. Possible applications of this powerful method include determining bioaerosol sampler performance, determining bioaerosol characteristics in different environmental samples, and controlling effectiveness of air cleaning techniques.

In our current investigation, FCM/FL was applied to evaluate the sampling performance of impingement (AGI-30 all-glass impinger) and filtration (track-etched polycarbonate filter) with different types of fluorescent dye staining (cell membrane integrity and metabolism), and then it was compared with a traditional culture method (culturability). Two bacterial aerosols (Escherichia coli and endospores of B. subtilis) and two fungal aerosols (Candida famata and Penicillium citrinum spores) were studied. In addition, the mechanisms of sampling stress due to impingement and filtration on bioaerosols were evaluated with different types of dye staining (cell membrane integrity and metabolism) and then compared with the traditional culture method (culturability).

MATERIALS AND METHODS

Test Bioaerosols

The two bacterial aerosols used here (E. coli and endospores of B. subtilis) represent sensitive and hardy bacteria, respectively, and the two fungal aerosols (C. famata and P. citrinum spores) represent mold and yeast, respectively, that are frequently found in Taiwan. The two bacterial cultures were E. coli (Culture Collection & Research Center in Taiwan , CCRC 10675) and B. subtilis (CCRC 12145). E. coli is a sensitive bacterial strain that is gram-negative and rod-shaped (0.3–1 μm by 1–6 μm) with an aerodynamic diameter of 0.87 μm (CitationLi et al. 1999), whereas B. subtilis endospores are resistant to many adverse conditions (CitationLin and Li 2002), are gram-positive, and are rod-shaped (0.7–0.8 μm by 1.5–1.8 μm) with an aerodynamic diameter of 1.35 μm (CitationLi et al. 1999). The two fungal strains were spores of P. citrinum Thom (CCRC 33168) and vegetative cells of C. famata (CCRC 22304). Spores (conidia) of P. citrinum are spheroidal and 2.0–3.6 μm in diameter (CitationTzean et al. 1994) with an aerodynamic diameter of 2.32 μm (CitationLi et al. 1999). C. famata are spheroidal and 2–10 μm in diameter (CitationTzean et al. 1994) with an aerodynamic diameter of 2.44 μm (CitationLin and Li 2002).

Active cultures of E. coli and C. famata were respectively inoculated into a nutrient broth (Difco) and a YM broth (Difco Laboratories, Detroit) and respectively incubated for 24 h at 37°C and at 25°C. For B. subtilis, the cells were initially inoculated on trypticase soy agar (TSA; Difco Laboratories, Detroit, MI, USA) for sporulation for 7 days at 37°C. B. subtilis growth was then harvested into sterile distilled water, agitated at 45 rpm for more than 24 h at room temperature, and then heated for 10 min at 80°C to kill vegetative cells. For P. citrinum, the sample strains were cultured on malt extract agar (MEA; pH 4.7, Difco Laboratories, Detroit, MI, USA) and incubated for 7 days at 25°C, and then washed out their spores by using Tween 80 prior to their generation. The resulting suspensions of P. citrinum were then aseptically washed with sterile phosphate-buffered saline (PBS) in a 15 ml sterile conical centrifuge tube, capped, and centrifuged twice at 4000 rpm (Model 2010, Kubota, Japan) for 5 min, and then again for an additional 5 min. After the supernatant was removed, the pellets were resuspended in a PBS solution. Samples were washed twice with PBS and diluted to the proper concentration (∼108 cells/ml) to optimize their generation. Optical microscopy confirmed that the centrifuged P. citrinum suspensions contained only pure spores (data not shown).

Aerosol Generation System

The aerosol generation system to evaluate the bioaerosol samplers were described in detail elsewhere (CitationLin and Li 1998). In brief, the sampling chamber is 12.5 cm in diameter and has a height of 27 cm. A collision three-jet nebulizer (BGI inc., Waltham, MA, USA) is used to nebulize the microbe suspension at 3 l/min of dry, filtered, and compressed laboratory air. The aerosol is then passed through a Kr-85 particle charge neutralizer (model 3077, TSI) and humidified and diluted with filtered air at 47 l/min to produce sufficient air flow for sampling in triplicate. The humidified gas stream is generated by passing compressed air through a humidity saturator. The relative humidity is maintained at 65% by adjusting the ratio of humidified gas stream to dry gas stream flow rate, and monitored with a hydrometer (Testo, Sekunden-Hydrometer 601) located in the sampling chamber.

Bioaerosol Samplers and Sample Processing

In the present experiments, 20 ml of sterile deionized water with 1% peptone and 0.01% Tween 80 was placed into an autoclaved AGI-30 impinger by the method of CitationThorne et al. (1992). Then, 0.005% antifoam A (Sigma Chemical Co., St. Louis, MO, USA) was added to reduce foaming and prevent excessive fluid loss. The AGI-30 sampler was operated at 12.5 l/min with a sampling time of 45 min to obtain sufficient cells for FCM analysis with a detection limit of 105 cells/ml. The suspension from this AGI-30 impinger was then vortexed for analysis by both FCM/FL and culture methods. Triplicate tests were performed for each experimental set.

A Nuclepore filter (Costar, Cambridge, MA, USA) is a track-etched polycarbonate filter consisting of a polycarbonate membrane with straight-through pores of uniform size. In this study, 37 mm diameter filters with 0.4 μm pores were loaded into open-face, three-piece plastic cassettes on cellulose pad supports. Before sampling, filters and support pads were autoclaved and plastic cassettes were sterilized with ethylene oxide. The filter sampler was operated at 4 l/min for 45 min. The collected bioaerosols were removed from the Nuclepore filter by first placing the filter in a test tube containing 4 ml of sterile deionized water and then vortexing the tube for 60 s. This vortexed suspension samples was then used for analysis by both FCM/FL and culture method.

CFU Counting

The numbers of CFUs in vortexed suspension samples were determined using TSA and MEA plates, plated with 10 serial dilutions and incubated for 24 h at 37°C for bacteria or 48 h at 25°C for fungi (Jensen et al. 1992).

Dye and Staining Protocols

For bioaerosol viability measurements, four stains were evaluated: AO, PI, YOPRO-1, and CTC. AO was used to stain all of the microorganisms by penetrating all cell membranes and staining the nucleic acid; PI and YOPRO-1 were used as cell membrane integrity indicators. From our previous findings, AO and YOPRO-1 are suitable to stain the four evaluated microorganisms. However, PI can not be used for B. subtilis endospores due to the poor separation of viable and unviable regions of this species. Moreover, CTC can be used only for cell-type bioaerosols (E. coli and C. famata), not for B. subtilis endospores and spores of P. citrinum (the low staining efficiency). Therefore, no experiments were conducted for B. subtili with PI and B. subtilis endospores and spores of P. citrinum with CTC. Regarding the optimal staining conditions each sample was individually stained with all four stains at optimal dye concentrations and optimal staining times of 5 μg/ml and 5 min for AO, 20 μM and 15 min for YOPRO-1, 25 μM, and 50 μM for PI, and 5 min and 8 h for CTC as previously determined.

FCM

FCM was used to analyze the cell concentration in suspensions labeled as AO, PI, YOPRO-1, and CTC. The vortexed suspension samples were diluted in PBS that had been filtered by using a 0.22 μm pore-size filter. FCM samples were prepared by mixing 0.5 ml of a stained cell suspension and 20 μl of a fluorescent bead suspension (7.37 × 107 beads/ml). The beads were monodispersed fluorescein-tagged 1.0 μm diameter spherical polystyrene beads (Fluoresbrite; Polyscience, Inc., Warrington, PA, USA) and were used to enable quantifications of cells in the FCM samples.

Analysis by FCM immediately after staining was done using a FacsCalibur flow cytometer (Becton Diskinson, San Jose, CA, USA) equipped with an air-cooled argon laser (488 nm, 15 mW). The samples were vortexed prior to their analysis. The sample was delivered at a low flow rate to yield 300–600 counts per second. In this study, at least 10000 counts of target cells were used for data acquisition. Five readings were recorded for each cell: forward scatter, side scatter, green fluorescence (515–545 nm), yellow-orange fluorescence (564–606 nm), and red fluorescence (<670 nm). The fluorescence of AO, PI, YOPRO-1, and CTC fell into green, red, green, and red fluorescence range, respectively.

Indicators for Sampling Efficiency Evaluation

1.

Culturability and viability with fluorescent dyes

The total cell concentration was determined using the AO stain, and viability was determined using the PI, YOPRO-1, and CTC stains. Because both PI and YOPRO-1 stained nonviable cells, viability with PI and YOPRO-1 staining was defined as

In contrast, because CTC stained metabolically active cells, viability with CTC was defined as

2.

Culturability and viability in bioaerosol samplers and the nebulizer (before bioaerosol generation)

The viabilities (Vtest and Vo) and culturabilities (Ctest and Co) of the microorganisms in the samplers and in the nebulizer, respectively, were defined as

3.

Culturability ratio and viability ratio

For assessing culturability and viability differences in bioaerosols between the samplers and the nebulizer, the culturability ratio (CR) and viability ratio (VR) were used to adjust the initial culturability and viability as the biological efficiency indicator and defined as

RESULTS AND DISCUSSION

The FCM/FL method was applied here to evaluate the sampling performance of impingement and filtration with different types of dye staining (cell membrane integrity and metabolism) and then compared with a traditional culture method (culturability).

Culturability and Viability in the Nebulizer

lists the measured culturability and viability with PI, YOPRO-1, and CTC before generation of E. coli, B. subtilis endospores, C. famata, and spores of P. citrinum, respectively. For E. coli, the viabilities before generation with the cell membrane integrity stains, PI and YOPRO-1, were higher than the culturability. The viability of B. subtilis before generation with the cell membrane integrity stains, YOPRO-1, was also higher than the culturability. In addition, the viability of B. subtilis endospores with YOPRO-1 before generation was much lower than the viabilities of the other bioaerosols with YOPRO-1 before generation. This low culturability and viability of B. subtilis might be due to the endospore preparation process, such as heating at 80°C for 10 min and/or agitating at 45 rpm for more than 24 h, both of which might cause viability loss. However, for both E. coli and C. famata, the viability with the metabolic indicator (CTC) was lower than the culturability. For all four bioaerosols, the culturability was higher than the viability with the metabolic indicator (CTC) but lower than the viability with the membrane integrity indicators (PI and YOPRO-1). The different stains and culture methods apparently reflect different physiologic state of bioaerosols (e.g., metabolic active, membrane integrity damaged, or culturable bioaerosols). In a previous FCM study (CitationHenningson et al. 1998), the viability before generation of F. tularensis (cell-type bacteria) in the same nebulizer was 0.93. In comparison to our study, the viability before generation of the cell-type bacteria, E. coli, was 0.96, 1.00, and 0.82 with PI, YOPRO-1, and CTC, respectively. Therefore, the initial viability for a sampled bioaerosol might depend on its preparation, its species, and the physiologic indicators used. In our study, different measured viabilities based on different physiologic indicators coupled with culturabilities should provide more detailed information about the bioaerosols.

Table 1 Culturabilities and viabilities of impinger and filter

Culturability and Viability in Bioaerosol Samplers

For both vegetative cell-type bioaerosols (E. coli and C. famata), the culturability of the filter sample was much lower than that of the impinger sample. For B. subtilis endospores and spores of P. citrinum, the culturability of the impinger sample was similar to that of the filter sample (). The culturability of E. coli in the AGI-30 impinger in our study was similar to those previously reported for S. marcescens (0.07), K. planticola (0.019), and C. allerginae (0.006) in AGI-30 impinger stained with AO and analyzed by EFM (CitationHeidelberg et al. 1997). As for the cell type F. tularensis (CitationHenningson et al. 1998), the culturability was also found to be smaller (0.0057) than the culturability of E. coli in our present study. From a previous report (CitationHernandez et al. 1999), the culturabilities of cell-type bacteria, E. coli and M. luteus, in both filter samples (0.2–0.7) and AGI-30 impinger samples (0.1–0.4) were all higher than the culturabilities of E. coli in our studies. These observed differences in culturabilities might be related to the species of evaluated bioaerosols and the different analytical methods. All of these previous studies mentioned above, however, only assessed cell-type bacteria, whereas in our study here we assessed the difference between bacterial and fungal bioaerosols as well as between spore- and cell-type bioaerosols.

From staining with AO and YOPRO-1, it was found that the viabilities in both the AGI-30 impinger and filter samples were much higher than the culturabilities of E. coli, B. subtilis endospores, C. famata, and spores of P. citrinum bioaerosols (). For PI-stained E. coli, C. famata, and spores of P. citrinum bioaerosols, the viabilities were also much higher than the culturabilities in both impinger and filter samples. In both inpinger and filter samples, the viabilities of CTC-stained E. coli were higher than the culturabilities of E. coli but the viabilities of CTC-stained C. famata were lower than the culturabilities of C. famata. This lower culturability for C. famata might be explained by the low staining efficiency of CTC for C. famata.

From our results, the viabilities in the filter samples for all four bioaerosols were lower than those in the impinger samples. Previously reported viabilities in impingers for S. marcescens, K. planticola, and C. allerginae were 0.64, 0.81, and 0.84, respectively, by the AO/AODVC method (CitationHeidelberg et al. 1997), and 0.2 for P. fluorescens by the SYTO9/PI-EFM method (Terzieva et al. 1996). In addition, the viability of E. coli with CTC in the impinger samples in our study agrees well with that reported by CitationHernandez et al. (1999), but it is about half that reported for F. tularensis by CitationHenningson et al. (1998). In those previous studies (CitationHeidelberg et al. 1997; CitationHernandez et al. 1999; Terzieva et al. 1996), only cell-type bacteria were under evaluation by a single dye staining with the determinations of viability in bioaerosol samplers without considering those in the nebulizer. There is only one previous investigation that considered viabilities in both samplers and nebulizer for cell-type bacteria (CitationHenningson et al. 1998). Based on our study, however, the culturability or viability in a sampler is not a representative indicator of the sampling efficiency of the sampler because the initial culturabilities and viabilities for different bioaerosol species vary widely. In our study, VR and CR were therefore proposed as indicators to characterize the effect of the sampling process on the culturability and viability. Based on our current study, viability during sampling is strongly influenced by the hardiness of the bioaerosol (i.e., cell type or spore type), as well as by the dye type used in the viability measurement. Therefore, the detailed evaluations of bioaerosol sampler performance for both bacterial and fungal bioaerosols (including cell types and spore types) with three different viability indicators and culturability indicator might be useful for sampler selection.

CR and VR

lists the measured CR and VR with PI, YOPRO-1, and CTC of cell-type E. coli and C. famata. In addition, it also showed the measured CR and VR with YOPRO-1 of B. subtilis endospores and spores of P. citrinum. The P. citrinum spore had the highest CR and VR of impingement and filtration. For the two vegetative celltypes (E. coli and C. famata), CR of filtration was much smaller than that during impingement. However, CR of impingement in our findings was much smaller than that (CR = 0.88) reported by CitationHenningson et al. (1998). This might be explained by different fluorescence labeling techniques. For the two spore types (B. subtilis endospores and spores of P. citrinum), CR of impingement was similar to that of filtration (). Our results strongly suggest that sampling stress differed significantly between that induced by impingement and by filtration for vegetative cell types, but not for spore types. In addition, impingement is reportedly the superior method for preserving the culturability of vegetative cell-type bioaerosols (CitationLin and Li 1999a).

Table 2 CR and VR of impinger and filter

shows that VRs of C. famata with PI, YOPRO-1, and CTC during impingement were similar to that of E. coli. However, VRs of P. citrinum with PI and YOPRO-1 during impingement were similar to that of B. subtilis with YOPRO-1. Of filtration, VRs of E. coli with PI and YOPRO-1 was similar to that of C. famata, whereas VR of E. coli with CTC was much smaller than that of C. famata. In addition, VR values of P. citrinum were slightly higher than that of B. subtilis. Therefore, VRs obtained with PI and YOPRO-1 indicated that the effect of sampling stress on the integrity of the cell membrane strongly depended on whether the bioaerosol strains were hardy or fragile. In addition, the metabolic activity of E. coli was more sensitive to the filtration process compared with that of C. famata, possibly due to the effect of dehydration on the metabolic activity of E. coli during filtration. The VR values of the four bioaerosols of impingement were all higher than those of filtration, possibly due to higher stress on the bioaerosols from filtration than that from impingement when the viability mechanism was assessed. Therefore, for better preservation of viability in bioaerosol sampling, an impinger is superior to a filter,especially when studying metabolic mechanisms. Regarding VR of the vegetative cell-type bioaerosols in the AGI-30 impinger, the VR (0.79) of F. tularensis was reported to be higher than those of E. coli observed in our study (CitationHenningson et al. 1998). To summarize, the differences in effect on cell membrane integrity and on cell metabolism due to sampling stress might be related to the characteristics of the bioaerosol (e.g., hardy or fragile) and to the methods used to analyze the viability of the bioaerosol.

The differences between culturability and viability during impingement are revealed by the ratio VR/CR. For E. coli, VR/CR was 11 with PI, 9.6 with YOPRO-1, and 5.7 with CTC, and for C. famata, it was 7.8, 7.4, and 3.9, respectively. For P. citrinum, VR/CR was 2.5 with either PI or YOPRO-1 and 6.2 for B. subtilis with YOPRO-1. These results clearly show that the traditional culture method to determine culturability underestimated the viability of the bioaerosols. The difference in effect of sampling stress induced by impingement and by filtration on culturability is revealed by the ratio CRFiltration/CRImpingement. This ratio was 0.07 for E. coli and 0.38 for C. famata, indicating that the culturability preservation by filtration was much smaller than that by impingement for vegetative cell-type bioaerosols. In contrast, this ratio was 1.07 for B. subtilis and 1.34 for P. citrinum, indicating that the culturability preservation by filtration was similar to that by impingement for spore-type bioaerosols.

CONCLUSION

Here, flow cytometry with FCM/FL was applied to evaluate the sampling performance of impingement (AGI-30 all-glass impinger) and filtration (track-etched polycarbonate filter) with different types of fluorescent dye staining (cell membrane integrity and metabolism), and then compared with a traditional culture method (culturability). Furthermore, the effect of sampling stress on the metabolism mechanism and on the cell membrane integrity of bioaerosols was evaluated by staining the collected bioaerosol samples with several types of dye. To summarize, sampler performance for bioaerosols strongly depended on the type of viability indicators used. The current study provides a comprehensive evaluation for applying FCM with dye in assessing sampling efficiency in both viability and culturability. This method can provide information on selecting the appropriate sampler and of exposure and health assessment of bioaerosols.

Acknowledgments

This work was partially supported by grant NSC 92-2320-B-002-149 from the National Science Council, Republic of China. Pei-Shih Chen was supported by a graduate scholarship from the same grant during the part of this research effort.

Notes

a

b

*

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