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Original Articles

Recruitment of Polycomb Repressive Complex 2 is Essential to Suppress the Target Chromatin in Arabidopsis

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Pages 131-145 | Published online: 02 Nov 2016
 

ABSTRACT

The polycomb group (PcG) proteins play important roles in repressing gene expression by modifying chromatin. PcG proteins usually form multiple protein complexes, such as Polycomb Repressive Complex 1 (PRC1) and PRC2 complexes, to repress gene expression. At least three PRC2 complexes have been identified in Arabidopsis that are required for normal plant development. PRC2 complexes repress gene expression through trimethylating lysine 27 on histone 3. Sequentially, PRC1 complexes recognize and bind to H3K27me3 mark generated by PRC2 complexes and monoubiquitylate lysine 119. However, neither the recruitment of PRC nor the regulation mechanisms of PRC functions are well understood. Recent findings suggest that the recruitment of PRC2 complexes to the target chromatin is not simple. Polycomb Response Elements (PREs) in the promoter regions of several PRC2 target genes, transcriptional factors, long noncoding RNAs (lncRNAs), and PRC2 associated-proteins have been documented to be involved in PRC2 targeting. In this review, we focus on the recent findings on PRC2 targeting and their regulatory roles in plant development by repressing gene expression.

Abbreviations

ABI3=

ABA Insensitive 3

AEBP2=

Adipocyte Enhancer-Binding Protein 2

AFL=

ABI3- FUS3- LEC2

AG=

AGAMOUS

AGO4=

ARGONAUTE 4

APOLO=

Auxin Regulated Promoter Loop

ARID=

AT-Rich Interactive Domain

AS1=

Asymmetric Leaves 1

AS2=

Asymmetric Leaves 2

AtCYP71=

Cyclophilin 71

BBR/BPC=

Barley B Recombinant/Basic Pentacysteine

BLI=

BLISTER

BP=

BREVIPEDICELLUS

CLF=

CURLY LEAF

ChIP=

Chromatin Immunoprecipitation

CKROX/TH-POK=

Kruppel-Related Zinc-Finger Protein/T-Helper Inducing POZ/KRUPPEL-Like Factor

CpG Island=

CpG Dinucleotide

COLDAIR=

Cold Assisted Intronic Noncoding RNA

DSP1=

Dorsal Switch Protein 1

EED=

Embryonic Ectoderm Development

EMF1=

Embryonic Flower 1

EMF2=

Embryonic Flower 2

ESC=

Extra Sex Combs

E(Z)=

Enhancer of Zeste

EZH1=

Enhancer of Zeste Homolog 1

EZH2=

Enhancer of Zeste Homolog 2

FIE=

Fertilization Independent Endosperm

FIS1=

Fertilization Independent Seed 1

FIS2=

Fertilization Independent Seed

FLC=

Flowering Locus C

FT=

Flowering Locus T

FUS3=

FUSCA 3

FM=

Floral Meristem

GAF=

GAGA Factor

Z=

ZESTE

H2AK119ub=

Monoubiquitylation of lysine 119 on Histone 2A

H3K27me3=

Trimethylation of lysine 27 on histone 3

HFD=

Histone Fold Domain

HOTAIR=

HOX Antisense Intergenic RNA

HOX=

Homeobox

IM=

Inflorescence Meristem

INO=

INNER NO OUTER

JMJC=

Jumonji C

KNAT2=

Knotted-Like from Arabidopsis Thaliana 2

KNOX=

Knotted 1-Like Homeobox

KNU=

KNUCKLES

LEC1=

Leafy Cotyledon 1

LEC2=

Leafy Cotyledon 2

LHP1/TFL2=

Like Heterochromatin Protein 1/Terminal Flower 2

lncRNA=

long noncoding RNA

MEA=

MEDEA

MSI1/2/3/4/5=

Multiple Suppressor OF IRA 1/2/3/4/5

ncRNA=

noncoding RNA

Nurf55/p55=

Nucleosome Remodeling Factor 55 kDa Subunit

Pc=

Polycomb

PcG=

Polycomb Group

PCL3=

Polycomb-Like 3

PCL=

Polycomb-Like

Ph=

Polyhomeotic

PHD=

Plant Homeodomain

PHE1=

PHERES 1

Pho=

PLEIOHOMEOTIC

PID=

PINOID

PRC1=

Polycomb Repressive Complex 1

PRC2=

Polycomb Repressive Complex 2

PRE=

Polycomb Response Element

POL II=

RNA Polymerase II

POL V=

RNA Polymerase V

Psc=

Posterior Sex Combs

PSQ=

PIPSQUEAK

RBAP46/48=

Retinoblastoma-Associated Protein 46 and 48

RdDM=

RNA Dependent DNA Methylation

RLE=

Repressive LEC2 Element

SAM=

Shoot Apical Meristem

Sce=

Sex Comb Extra

SCR=

Scarecrow

sncRNA=

Short ncRNA

SEP3=

SEPALLATA 3

STK=

SEEDSTICK

STM=

SHOOTMERISTEMLESS

SU(Z)12=

Suppressor of Zeste 12

SP1=

Specificity Factor 1

SWN=

SWINGER

SVP=

Short Vegetative Phase

TAF13=

TBP-Associated Factor 13

TEL1=

Ten-Eleven Translocation 1

UCL1=

Upward Curly Leaf 1

VAL1/2/3=

VP1/ABI3-Like 1/2/3

VEL1=

Vernalization 5/VIN3-Like 1

VIL1=

VIN3-LIKE 1

VIN2=

Vernalization Insensitive 2

VIN3=

Vernalization Insensitive 3

VRN1=

VERNALIZATION 1

VRN2=

VERNALIZATION 2

WUS=

WUSCHEL.

Funding

This work was supported by National Natural Science Foundation of China (NSFC) [grant number 31371222] and Basic Research Fund for Key Laboratory of Education Department of Liaoning Province [grant number LZ2014033].

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