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Letter to the Editors

Molecular dynamics simulation studies on influenza A virus H5N1 complexed with sialic acid and fluorinated sialic acid

, , , , , & show all
Pages 4813-4824 | Received 17 Sep 2018, Accepted 20 Dec 2018, Published online: 22 Feb 2019
 

Abstract

Abbreviations
HA=

Hemagglutinin

MD=

Molecular Dynamics

MM-PBSA=

Molecular Mechanics Poisson–Boltzmann Surface Area

NA=

Neuraminidase

NAMD=

Nanoscale Molecular Dynamic Simulation

PMEMD=

Particle Mesh Ewald Molecular Dynamics

RMSD=

Root-Mean-Square Deviation

RMSF=

Root-Mean-Square Fluctuation

SIA=

sialic acid

VMD=

Visual Molecular Dynamics

Communicated by Ramaswamy H. Sarma

Disclosure statement

The authors declare that there is no conflict of interest in this work.

Additional information

Funding

K.V, C.A and M.M.G acknowledge the Department of Biotechnology, Ministry of Science and Technology (DBT), India. [Project funding no. BT/PR13410/BID/7/536/2015]. R.A.J project assistant acknowledges the Department of Biotechnology Ministry of Science and Technology (DBT), India. [Project funding no. BT/PR13410/BID/7/536/2015].

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