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Original Articles

Model for Molecular Interactions in Helicoidal Cavities

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Pages 289-301 | Received 01 Nov 1995, Accepted 01 Apr 1996, Published online: 23 Sep 2006
 

Abstract

A Fourier transform procedure using curvilinear coordinates is developed to determine the interaction potential between a molecule and a helicoidal cavity. When the molecular orientation is free inside the cavity, straightforward criteria for the applicability of the continuum approximation and the molecular confinement along the cavity axis are obtained. At low temperature, the molecule does not rotate freely, being generally trapped in potential wells outside the helix axis and numerical calculations are required to verify whether these criteria hold. An application to N2 trapped in an AlPO4-5 cavity shows that the molecule center of mass is confined close to the cavity axis with the molecular axis collinear to the cavity axis.

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