Abstract
During bacterial growth an increased mRNA level is usually linked with higher rate of metabolism related to biodegradation of an unusual compound. In this study, quantitative gene expression data derived from mRNA level reveal the presence of pesticide degrading genes in 6 bacterial isolates showing biodegradation of cypermethrin (SG2, SG4), sulfosulfuron (SA2, Sulfo3), and fipronil (FA3, FA4). A correlation existed between the level of esterase coding mRNA and mineralization of cypermethrin in SG2 and SG4. Similarly the level of EST coding mRNA increased with biodegradation of fipronil and sulfosulfuron in FA3, FA4, SA2, and Sulfo3. Expression of est gene was observed in all the bacterial strains, but their level of expression was different. Bacterial strains SG4 and Sulfo3 showed higher level of est gene expression as compared to SG2, FA3, FA4, and SA2 and was in the range of approximately 30- to 60-fold, respectively, in comparison to control. Expression of genes for aldehyde dehydrogenase was observed in SG4 and Sulfo3. We report co expression of aldh (1000 bp) and est (∼550 bp) genes at the same time of pesticide induction/biodegradation.
Author contributions
Pankaj Bhatt wrote the experiment; Pankaj Bhatt, Saurabh Gangola, Parul Chaudhary, Priyanka Khati, Govind Kumar, and Anita Sharma conducted the experiment; Anita Sharma and Anjana Srivastava provided experimental materials and guidance. All authors read and approved the final manuscript
Acknowledgments
Authors are thankful to Head, Microbiology and Dean CBSH, College of Basic Sciences, and Humanities GBPUA&T, Pantnagar for providing facilities. GC, HPLC facilities, provided by Department of Chemistry is duly acknowledged.
Competing interests
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential competing interest.
Consent for publication
The authors approved the consent for publishing the manuscript.
Funding
This work is financially supported by Ministry of Environment and Forests and Dean College of Basic Sciences and Humanities Pantnagar US Nagar, India.