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Articles

Analysing spatio-temporal autocorrelation with LISTA-Viz

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Pages 1515-1526 | Received 24 Apr 2010, Accepted 09 Jul 2010, Published online: 06 Oct 2010
 

Abstract

Many interesting analysis problems (e.g. disease surveillance) would become more tractable if their spatio-temporal structure was better understood. Specifically, it would be helpful to be able to identify autocorrelation in space and time simultaneously. Some of the most commonly used measures of spatial association are LISA statistics, such as the Local Moran's I or the Getis-Ord Gi*; however, these have not been applied to the spatio-temporal case (including many time steps) because of computational limitations. We have implemented a spatio-temporal version of the Local Moran's I and claimed two advances: first, we exploit the fact that there are a limited number of topological relationships present in the data to make Monte Carlo's estimation of probability densities computationally practical, and thereby bypass the ‘curse of dimensionality’. We term this approach ‘spatial memoization’. Second, we developed a tool (LISTA-Viz) for interacting with the spatio-temporal structure uncovered by the statistics that contains a novel coordination strategy. The potential usefulness of the method and the associated tool are illustrated by an analysis of the 2009 H1N1 pandemic, with the finding that there was a critical spatio-temporal ‘inflection point’ at which the pandemic changed its character in the United States.

Acknowledgements

The support of the VACCINE Center (Visual Analytics for Command, Control and Interoperability Environments, Grant 2009-ST-061-CI0001), the Contextual influences on the category construction of geographic-scale movement patterns (ConCat) grant from the National Science Foundation (Grant 0924534), the Vaccine Modeling Initiative grant from the Bill & Melinda Gates Foundation (Grant 49279) and a Wilson Travel Grant from the college of Earth and Mineral Sciences at the Pennsylvania State University are gratefully acknowledged; however, no endorsement is implied.

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