Synthesis of 1-(β-D-Galactopyranosyl)Thymine-6′-O-Triphosphate – A Potential Probe to Generate Reactive Dialdehyde for DNA–Enzyme Cross-Linking

Abstract

Concise, facile, and efficient synthesis of 1-(β-D-galactopyranosyl)thymine-6′-O-triphosphate, a potential probe that can generate reactive dialdehyde for DNA–enzyme cross-linking applications, was described starting from O,O’-bis(trimethylsilyl)thymine. Stannic chloride promoted glycosylation of 1,2,3,4,6-penta-O-acetyl-α-D-galactopyranose with O,O’-bis(trimethylsilyl)thymine, resulting in the formation of 1-(2,3,4,6-O-tetraacetyl-β-D-galactopyranosyl)thymine in 91% yield. Acetyl deprotection using methanolic ammonia afforded 1-(β-D-galactopyranosyl)thymine in 98% yield. The modified one-pot methodology was used to convert 1-(β-D-galactopyranosyl)thymine into 1-(β-D-galactopyranosyl)thymine-6′-O-triphosphate in 72% yield, which involves the formation of 1-(β-D-galactopyranosyl)thymine dichlorophosphoridate using POCl₃ as the reagent at the monophosphorylation step followed by reaction with tributylammonium pyrophosphate and hydrolysis of resulting cyclic intermediate.

Keywords:

• Galactopyranosylthymine triphosphate
• phosphorylation
• concise synthesis
• one-pot methodology
• nucleoside triphosphate