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Abstract
Considering the rhizosphere microbes easily affected by the environmental factors, we formulate a three-dimensional diffusion model of the rhizosphere microbes with the impulsive feedback control to describe the complex degradation and movement by introducing beneficial microbes into the plant rhizosphere. The sufficient conditions for existence of the order-1 periodic solution are obtained by using the geometrical theory of the impulsive semi-dynamical system. We show the impulsive control system tends to an order-1 periodic solution if the control measures are achieved. Furthermore, we investigate the stability of the order-1 periodic solution by means of a novel method introduced in the literature [Y. Ye, The Theory of the Limit Cycle, Shanghai Science and Technology Press, 1984.]. Finally, mathematical results are justified by some numerical simulations.
1. Introduction
It has long been recognized the rhizosphere contains the abundant rhizosphere microbes such as bacteria, fungi, protozoa and nematodes, which can make an important contribution to decomposition of the contaminants [Citation1]. Since the rhizosphere microbe is easily affected by multiple factors including environmental parameters, physiochemical properties of the soil, biological activities of the plants and chemical signals from the plants and bacteria which inhabit the soil adherent to root-system [Citation2], many researchers [Citation3–6] tried to simulate the degradation process by using all kinds of mathematical models. Sung [Citation3] proposed a simple approach to quantify the microbial biomass in the rhizosphere, which was applied to the field microbial biomass data. Kravchenko [Citation4] presented a quantitative model to describe the population of associate nitrogen-fixing in the plant rhizosphere as dependent on the rate of carbon substrate exudation by plant roots. Authors [Citation5] showed the exudation dynamics served as a driving force for microbial and biogeochemical excitation phenomena and led to the development of the emerging attractors and synchronized oscillations of microbial populations and oxygen concentrations. Scott et al. [Citation6] proposed a mathematical model for dispersal of bacterial inoculants colonising the water rhizosphere to describe bacterial growth and movement in the rhizosphere.
In fact, the efficiency of the rhizosphere microbial degradation depends mainly on the concentration of the rhizosphere microbes [Citation7]. The microbial inoculation of the rhizosphere is one of the most promising methods for increasing agricultural productivity and the efficiency of soil pollutant biodegradation [Citation8]. The authors [Citation8] formulated a mathematical modelling of plant growth-promoting rhizobacteria (PGPR) inoculation into the rhizosphere and showed that the competition for limiting resources between the introduced population and the resident microorganisms was the most important factor determining PGPR survival.
Recently, the geometric theory of impulsive semi-dynamical system has been applied into the chemostat model [Citation9–15]. Zhao et al. [Citation13] proposed a nonlinear mathematical model of the rhizosphere microbial degradation with the impulsive feedback control and they investigated sufficient conditions for existence of the order-1 or order-2 periodic solution. Reference [Citation14] investigated a chemostat model with Beddington-DeAnglis uptake function where the sufficient conditions for existence and stability of the order-1 periodic solution were given.
Although the efficiency of the rhizosphere microbial degradation will usually increase before the concentration of the rhizosphere microbes reaches some critical value, the degradation efficiency will decrease if the concentration of the rhizosphere microbes is higher than the critical value(which can be measured in advance). Therefore, it is necessary to reduce the concentration of the rhizosphere microbes lower than the critical value. In this paper, we will construct a three-dimensional diffusion model of differential equations with the impulsive state feedback control by introducing beneficial microbes into the plant rhizosphere so as to further understand the complex dynamics of the rhizosphere microbial degradation.
The paper is organized as follows: a mathematical model of the microbial degradation with impulsive state feedback control is proposed in Section 2. In Section 3, the qualitative analysis of system without impulsive control is given. Furthermore, the existence and stability of order-1 periodic solution are investigated in Section 4. Finally, we give some numerical simulations and a brief discussion.
2. Development of the model and preliminaries
Chemostat is an apparatus for culturing bacterial at a constant rate by controlling the supply of nutrient medium, which is used for representing all kinds of microorganism systems such as lake, waste-water treatment [Citation15–18]. To investigate the dynamics of the process of the rhizosphere microbial degradation, we directly consider the plant rhizosphere system as a chemostat model and divide the rhizosphere system into two patches (defined as patch 1 and patch 2), which is connected by the diffusion of the rhizosphere microbes (see Figure ).
Figure 1. Illustration of the diffusion and impulsive feedback control. A denotes the monitor which can detect concentration of the indigenous microorganism. Patch 1 shows the region of the inoculation microorganism. Patch 2 denotes the region of the indigenous microorganism.
![Figure 1. Illustration of the diffusion and impulsive feedback control. A denotes the monitor which can detect concentration of the indigenous microorganism. Patch 1 shows the region of the inoculation microorganism. Patch 2 denotes the region of the indigenous microorganism.](/cms/asset/a9589f86-404c-4c37-8aae-555cbf0347f1/tjbd_a_1786860_f0001_oc.jpg)
We introduce the competitive microorganism into the rhizosphere to enhance the degradation efficiency of the indigenous microorganism and prevent the microorganism inhibition. Suppose is the organic concentration of the rhizosphere and
is the concentration of the inoculation microorganism.
denotes the concentration of the indigenous microorganism at time t. Based on the references [Citation1–14] and the principle of chemostat model [Citation15–18], the following mathematical model is established:
(1)
(1) where all coefficients are positive constants.
The model is derived as follows:
When the concentration of the indigenous microorganism reaches the critical value h (predetermined threshold), the negative effects, such as airborne contamination and production inhibition, might occur. To improve the efficiency of the indigenous microorganism and decrease the negative effects, it is necessary to control the concentration of indigenous microorganism lower than the certain level (h) by extracting the indigenous microorganism (
) and releasing the inoculation microorganism (τ).
Suppose
is the dilution rate,
denotes the input concentration of the pollutants.
and
are yield terms(we suppose
=
=δ for the late convenience of the computation).
and
are the maximum specific growth rates.
is the amount of the inoculation microorganism and
is the ratio of the indigenous microorganism extracted from the rhizosphere. h is a critical value (predetermined threshold).
is diffusive rate between patch 1 and patch 2, which shows the net exchange from patch j to patch i is proportional to the difference
(i, j = 1, 2 and
).
Before discussing the periodic solution of system (Equation1(1)
(1) ), we firstly consider the qualitative property of (Equation1
(1)
(1) ) without the impulsive effect.
Lemma 2.1
Suppose is a solution of (Equation1
(1)
(1) ) subject to
then
for all
and further
if
From the first three equations, we have
which shows
and we obtain
(2)
(2) Therefore, we obtain the dynamical behaviour of system (Equation1
(1)
(1) ) can be determined by the following system:
(3)
(3)
3. Qualitative analysis
Before discussing the periodic solution of system (Equation3(3)
(3) ), we should consider the qualitative properties of (Equation3
(3)
(3) ) without the impulsive effect.
(4)
(4) To obtain the equilibria of the system (Equation4
(4)
(4) ), we define
(5)
(5) we obtain
and
(6)
(6) where
(Furthermore,
according to (Equation2
(2)
(2) )).
Obviously, Equation (Equation6(6)
(6) ) has a solution
and a positive solution
for
and
Thus, system (Equation4
(4)
(4) ) has a trivial equilibria
and a positive equilibrium
(
and
).
Let the parameters with we can compute the positive equilibrium
[see Figure (a)] and Figure (b) shows the vector field of system (Equation4
(4)
(4) ) with the parameters
Figure 2. (a) The intersection point of the two isoclinal lines with the parameters (b) The vector field of system (3.1) with the parameters
![Figure 2. (a) The intersection point of the two isoclinal lines with the parameters μ1=10,μ2=6,δ=0.5,Q~=0.55,ρ=0.23,S0=8. (b) The vector field of system (3.1) with the parameters μ1=10,μ2=6,δ=0.6,Q~=0.55,ρ=0.23,S0=8.](/cms/asset/7afdf576-758f-4cb0-8fc8-d0c028df5347/tjbd_a_1786860_f0002_oc.jpg)
Next, we discuss the local stability of the trivial equilibrium . The Jacobian matrix evaluated at the point
is
Defining the eigenvalues of
by
and
we have
,
Thus, trivial equilibria
is unstable node.
Theorem 3.1
The positive equilibrium is globally asymptotically stable if
holds, where
are given above.
Proof.
Firstly, we analyse the local stability of the positive equilibrium. The Jacobian matrix at is given as follows:
We have
(7)
(7) where
From (Equation6
(6)
(6) ), we have
while
holds. If
is satisfied, then positive equilibrium
is locally asymptotically stable. That is, the positive equilibrium
is locally asymptotically stable for
, where
are given above.
We consider a Lyapunov function given by
where
and
are positive constant. The derivative of
along the system (Equation4
(4)
(4) ) is described as follows:
We obtain
by choosing
, which implies the positive equilibrium
is globally asymptotically stable.
4. Existence and stability of the order-1 periodic solution
Definition 4.1
[Citation19]
A general planar impulsive semi-dynamical systems with the state-dependent feedback control is presented in the following:
(8)
(8) The solution of system (Equation8
(8)
(8) ) is denoted by
. Suppose the initial point of mapping
is given, ϕ is a continuous mapping
, φ is called as impulse mapping, where
and
are straight lines or curves on the plane in the positive quadrant
.
denotes the impulsive set and
is the phase set.
Definition 4.2
[Citation19]
Let M denote the impulsive set and N be the phase set. Suppose be a mapping. For any point
there exists a
such that
, then
is called the successor function of point P and the point
is called the successor point of P.
4.1. Existence of the order-1 periodic solution
In this section, we denote the impulsive set , the impulsive function
, and the phase set
From the above analysis, we obtain the positive equilibrium is globally asymptotically stable. In the following, we investigate the existence of the order-1 periodic solution of system (Equation3
(3)
(3) ) under this condition.
Obviously, the trajectories starting from the region will tend to the positive equilibrium
after impulsive effect of at most one time.
Theorem 4.1
If then system (Equation3
(3)
(3) ) has a unique order-1 periodic solution.
Proof.
Suppose the impulsive set M intersects the axis at the point A and the isoclinal line
at the point B. The phase set N intersects the
axis at the point C and the isoclinal line
at the point D. The trajectory starting from the point C intersects the impulsive set M at the point E and reaches the point F due to the impulsive effect
. The point F is the successor point of the point C. Thus the successor function of the point C satisfies
Similarly, the trajectory from the point D inevitably intersects the line segment AB at the point
The point
is mapped into the point
after pulses. Furthermore, point
is surely on the left of point D from the property of the vector field, hence the successor function of the point D becomes
According to the continuity of the successor function, we obtain that there exists a point
such that
that is, system (Equation3
(3)
(3) ) exists an order-1 periodic solution (see Figure ).
Figure 3. The existence of order-1 periodic solution of system (Equation3(3)
(3) ) for
![Figure 3. The existence of order-1 periodic solution of system (Equation3(3) {dx1dt=(μ1(δS0−x1−x2)−Q~)x1+ρ(x2−x1),dx2dt=(μ2(δS0−x1−x2)−Q~)x2+ρ(x1−x2),}x2<h,Δx1=τ,Δx2=−θx2,}x2=h.(3) ) for x2<x2∗.](/cms/asset/9b5dd228-7ccb-405e-9c0b-a2c334a8274a/tjbd_a_1786860_f0003_oc.jpg)
4.2. Stability of the order-1 periodic solution
In the following, we will present some Lemmas of the continuous dynamic system [Citation20] to investigate the stability of the order-1 periodic solution.
Lemma 4.2
[Citation20]
Suppose the function is a continuous map from the line segment N to itself and s = 0 is a fixed point of the continuous map
The fixed point s = 0 is stable(unstable) if the part near origin of curve
on the plane
lies in the interior of the domain
Lemma 4.3
[Citation20]
If is continuous and derivative at the neighbourhood of the point
the fixed point s = 0 is stable(unstable) for
In Figure (a), we suppose rectangular coordinate of B is and obtain the relation of the point
between the rectangular coordinates
and curvilinear coordinates
by using the geometric method. Thus we have:
(9)
(9) where
and
are the values of P, Q at the point B, that is,
Figure 4. (a) The stability of the order-1 periodic solution of system (Equation3(3)
(3) ) for
(b)
is the order-1 periodic solution of system (Equation11
(11)
(11) ).
![Figure 4. (a) The stability of the order-1 periodic solution of system (Equation3(3) {dx1dt=(μ1(δS0−x1−x2)−Q~)x1+ρ(x2−x1),dx2dt=(μ2(δS0−x1−x2)−Q~)x2+ρ(x1−x2),}x2<h,Δx1=τ,Δx2=−θx2,}x2=h.(3) ) for x2<x2∗. (b) Γn is the order-1 periodic solution of system (Equation11(11) {dx1dt=(μ1(δS0−x1−x2)−Q~)x1+ρ(x2−x1),dx2dt=(μ2(δS0−x1−x2)−Q~)x2+ρ(x1−x2),}x2<h,Δx1=τ,Δx2=−θx2,}x2=h.(11) ).](/cms/asset/3d8fcfe4-8706-48b9-b031-55206db74e88/tjbd_a_1786860_f0004_oc.jpg)
From Equation (Equation9(9)
(9) ), we deduce:
we obtain
(10)
(10) It is easy to obtain n = 0 is a special solution of system (Equation10
(10)
(10) ). Since function P and Q is continuous and derivative, function
also exists continuous partial derivative about the parameter n. Thus, we obtain:
By computing, we have
Therefore, Equation (Equation10
(10)
(10) ) becomes
and we obtain
where l is the length of the curve.
For system (Equation3(3)
(3) ), we try to introduce the method of the square approximation to investigate the stability of the order-1 periodic solution by using theory of the limit cycle.
Suppose the orbit starting from the point B intersects the impulsive set M at point A, then jumps into the point B. The closed orbit composed of the curve and line segment AB is defined as a closed order-1 periodic limit (denoted as Γ, see Figure (a). We draw the normal line n passing through
and establish the coordinate system
on the point B. Choose any point
and the trajectory starting from the point D intersects vertically
axis at point
, then intersects impulsive set M at the point E. The point F is defined as the phase point of the point E due to impulsive effect. The trajectory passing trough point F intersects vertically
axis at point
as time t increases again.
In Figure (a), represents the ordinate of
and n denotes the ordinate of
The Poincare map transforms
into
and the successor function is expressed as
. If
then curve
starting from the neighbourhood of point B will tend to the closed order-1 periodic limit
(
), which shows the closed order-1 periodic limit is stable. Thus we have
Theorem 4.4
Suppose l is the length of the closed orbit Γ of system (Equation3(3)
(3) ) and the closed order-1 periodic limit Γ is stable for
According to the formula of the arc length we obtain
where
Corollary 4.5
[Citation20]
Suppose the integral along the order-1 periodic solution Γ satisfies , then the order-1 periodic solution Γ is stable.
Suppose is the
periodic solution of system (Equation4
(4)
(4) ), we obtain the value of the integral equals to zero along the periodic solution of system (Equation4
(4)
(4) ), that is,
Denote In the following, we will prove the value of integral along the closed order-1 periodic limit Γ has a similar result.
Lemma 4.6
Assume the function is continuous and differentiable, then integral along the closed order-1 periodic limit Γ of system (Equation3
(3)
(3) ) satisfies
where T is the period of the closed order-1 periodic limit Γ.
Proof.
Suppose Γ is the closed order-1 periodic limit Γ of system (Equation3(3)
(3) ) and
denotes the curve of system (Equation2
(2)
(2) ) from the point
to the point
where
,
.
denotes the line segment
. Making a time variable
we transform system (Equation3
(3)
(3) ) into the following system
(11)
(11) Let
denote the closed order-1 periodic limit of system (Equation11
(11)
(11) ). Since system (Equation11
(11)
(11) ) is topologically equivalent to system (Equation3
(3)
(3) ), the property of the closed order-1 periodic limit
is similar to Γ.
Let denote the curve of system (Equation11
(11)
(11) ) from the point
to the point
where
,
.
denotes the line segment
[see Figure (b)]. The line segment AB is satisfied as
Obviously, system (Equation11
(11)
(11) ) is the square approximation of system (Equation3
(3)
(3) ), which implies
as
Thus, we have
which shows
Therefore, we have the following result.
Theorem 4.7
Assume the integral along the order-1 periodic solution Γ of system (Equation3(3)
(3) ) satisfies
(12)
(12) then order-1 periodic solution Γ is stable.
Theorem 4.8
The order-1 periodic solution of system (Equation3(3)
(3) ) is stable.
Proof.
From the first two equations, we have
(13)
(13) Since it is difficult to judge the positive or negative of the sign of the expression (Equation13
(13)
(13) ), we make a topological transformation
by using the Dulac's Theorem [Citation20], system (Equation3
(3)
(3) ) is topologically equivalent to the following system:
we obtain the inequality
holds for
and
According to Theorem 4.6, we obtain the order-1 periodic solution is stable.
5. Discussion
In this paper, we formulate a three-dimensional diffusion model of the rhizosphere microbes with the impulsive feedback control to understand the complex process of the degradation and improve the degradation efficiency. Firstly, the positive equilibrium exists by using numerical simulation with the parameters
Globally asymptotical stability of the positive equilibrium
is proved by methods of Lyapunov function, which means that pollutant concentration
, inoculation concentration
and indigenous concentration
will become saturated and degradation ability has no further improvement. To enhance the degradation efficiency of the rhizosphere microbes, the model of the microbial degradation is proposed based on the impulsive semi-dynamical system. By using the geometric theory of the impulsive semi-dynamical system, we obtain system (Equation3
(3)
(3) ) exists an order-1 periodic solution for
, and the simulation is given in Figure with the parameters
Finally, we investigate the stability of the order-1 periodic solution in terms of the theory of the limit cycle.
Figure 5. Time series and phase portrait of the order-1 periodic solution of system (Equation3(3)
(3) ) with the parameters
![Figure 5. Time series and phase portrait of the order-1 periodic solution of system (Equation3(3) {dx1dt=(μ1(δS0−x1−x2)−Q~)x1+ρ(x2−x1),dx2dt=(μ2(δS0−x1−x2)−Q~)x2+ρ(x1−x2),}x2<h,Δx1=τ,Δx2=−θx2,}x2=h.(3) ) with the parameters μ1=10,μ2=6,δ=0.5,Q~=0.55,ρ=0.23,S0=8,h=0.33,τ=2,θ=0.2.](/cms/asset/eae82614-ce4b-4f29-a6ac-8b4e0d67b5ff/tjbd_a_1786860_f0005_oc.jpg)
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