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Original Research

The prognostic roles of ALDH1 isoenzymes in gastric cancer

, , , , , , & show all
Pages 3405-3414 | Published online: 07 Jun 2016

Abstract

Increased aldehyde dehydrogenase 1 (ALDH1) activity has been determined to be present in the stem cells of several kinds of cancers including gastric cancer (GC). Nevertheless, which ones of ALDH1’s isoenzymes are leading to ALDH1 activity remains elusive. In this study, we examined the prognostic value and hazard ratio (HR) of individual ALDH1 isoenzymes in patients with GC using “The Kaplan–Meier plotter” database. mRNA high expression level of ALDH1A1 was not found to be significantly correlated with the overall survival (OS) of all patients with GC followed for 20 years, HR =0.86 (95% confidence interval [CI]: 0.7–1.05), P=0.13. mRNA high expression level of ALDH1A2 was also not significantly correlated with OS for all patients with GC, HR =1.13 (95% CI: 0.91–1.41), P=0.25. mRNA high expression level of ALDH1A3 was found to be significantly correlated with worsened OS in either intestinal-type patients, HR =2.24 (95% CI: 1.44–3.49), P=0.00026, or diffuse-type patients, HR =1.91 (95% CI: 1.02–3.59), P=0.04. Interestingly, mRNA high expression level of ALDH1B1 was found to be significantly correlated with better OS for all patients with GC, HR =0.66 (95% CI: 0.53–0.81), P=7.8e–05, and mRNA high expression level of ALDH1L1 was found to be significantly correlated with worsened OS for all patients with GC, HR =1.23 (95% CI: 1–1.51), P=0.048. Furthermore, our results also indicate that ALDH1A3 and ALDH1L1 are potential major contributors to the ALDH1 activity in GC, since mRNA high expression levels of ALDH1A3 and ALDH1L1 were found to be significantly correlated with worsened OS for all patients with GC. Based on our study, ALDH1A3 and ALDH1L1 are potential prognostic markers and therapeutic targets for patients with GC.

Introduction

According to the World Health Organization, gastric cancer (GC), also known as stomach cancer, is the second most common cause of cancer-related death with 800,000 deaths caused by GC each year globally.Citation1 Despite the progresses in early diagnosis and multi-modal therapeutic modalities, at diagnosis, GC remains difficult to cure and prognosis remains poor for advanced disease in Western countries.Citation2,Citation3 Thus, in order to enhance the clinical consequence of patients with GC, exploration on the molecular mechanism of occurrence and progression of GC, as well as the development of prognostic biomarkers and drug targets, are still demanded and will assist to identify patients with high chances of GC recrudescence and deliver better prognosis and personalized treatments.

The aldehyde dehydrogenase 1 (ALDH1) family is detected at high levels in stem cells (SCs).Citation4Citation6 ALDH1 activity has been discovered to be increased in multiple myeloma, myeloid leukemia, and a number of solid cancers.Citation7Citation11 Wakamatsu et alCitation12 first showed that cancer stem cell (CSC) markers, the level of ALDH1 positivity, are significantly higher in metastatic diffuse-type lymph node than in the primary tumor. Levi et alCitation13 also observed that CSC markers, ALDH1, CD166, and LGR5, were detected in very low levels in normal human gastric mucosa, in contrast, significantly increased in gastric adenocarcinomas. Recently, Li et al reported that the expression of ALDH1A1 protein was significantly correlated with depth invasion, lymph node metastasis, stage of disease, as well as recurrence-free survival (RFS) and overall survival (OS).Citation14 However, the prognostic role of most of the individual ALDH1 isoenzyme in GC has not been determined. In addition, which ones of ALDH1’s isoenzymes are causing ALDH1 activity in GC remains elusive.

The “Kaplan–Meier plotter” (KM plotter) was developed from the database of Gene Expression Omnibus.Citation15 KM plotter can be utilized for the determination of prognostic role of individual genes in patients with cancer.Citation16,Citation17 Several genes so far have been reported using KM plotter in human breast cancer,Citation18Citation26 as well as in ovarian and lung cancer.Citation27 In the current study, we used KM plotter database and reported the prognostic role of individual ALDH1 isoenzymes in human patients with GC.

Materials and methods

We used an online databaseCitation16 to determine the relevance of individual ALDH1 members’ mRNA expression to OS. Currently, breast cancer,Citation16 lung cancer,Citation28 ovarian cancer,Citation29 and GC databases have been generated. All the cancer datasets were selected from Gene Expression Omnibus,Citation15 Cancer Biomedical Informatics Grid,Citation30 and The Cancer Genome Atlas.Citation28,Citation31 The database had a collection of clinical data including sex, perforation history, Lauren classification, differentiation, stage, HER2 status, and treatment. The patients with GC were followed up for 20 years. The database was finally created using gene expression data and survival information of 593 patients with GC. Five ALDH1 isoenzymes (ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, and ALDH1L1) were entered into the database (http://kmplot.com/analysis/index.php?p=service&cancer=breast)Citation28 to get KM survival plots. The certain gene mRNA expression above or below the median separates the cases into high expression and low expression. Hazard ratio (HR) and log rank P were determined and displayed.

Results

There are six sub-members in the ALDH1 family. We summarized their characteristics and listed them in . As Wu et alCitation26 reported, only ALDH1L2 was not found in www.kmplot.com among all the six ALDH1 isoenzymes, probably due to its low expression.

Table 1 Alternatively spliced variants and characterization of ALDH1 isoenzymes

We first checked the prognostic role of mRNA expression of ALDH1A1 in the database. The valid gene Affymetrix ID is 212224_at (ALDH1A1). For all patients, survival curves are plotted (n=593; ), for intestinal type (n=186; ), and for diffuse type (n=106; ). ALDH1A1 mRNA high expression was not found to be correlated with the OS for all patients with GC followed for 13 years, HR =0.86 (95% confidence interval [CI]: 0.7–1.05), P=0.13. ALDH1A1 mRNA high expression was also not found to be correlated with OS in intestinal-type patients, HR =0.72 (95% CI: 0.49–1.04), P=0.078, and in diffuse-type patients, HR =1.52 (95% CI: 0.87–2.66), P=0.13.

Figure 1 The prognostic value of ALDH1A1 expression in the database.

Notes: The valid Affymetrix ID is 212224_at (ALDH1A1). (A) Survival curves are plotted for all patients (n=593), HR =0.86 (95% CI: 0.7–1.05). (B) Survival curves are plotted for intestinal type (n=186), HR =0.72 (95% CI: 0.49–1.04). (C) Survival curves are plotted for diffuse type (n=106), HR =1.52 (95% CI: 0.87–2.66).
Abbreviations: HR, hazard ratio; CI, confidence interval.
Figure 1 The prognostic value of ALDH1A1 expression in the database.

Then, we checked the prognostic role of mRNA expression of ALDH1A2 in the database. The valid gene Affymetrix ID is: 207015_s_at (ALDH1A2). ALDH1A2 mRNA high expression was also not found to be correlated with OS for all patients with GC, HR =1.13 (95% CI: 0.91–1.41), P=0.25 (). Interestingly, ALDH1A2 mRNA high expression was found to be correlated with worsened OS in intestinal-type patients, HR =1.47 (95% CI: 0.99–2.19), P=0.057 (). In contrast, ALDH1A2 mRNA high expression was found to be correlated with better OS in diffuse-type patients, HR =0.59 (95% CI: 0.36–0.97), P=0.037 ().

Figure 2 The prognostic value of ALDH1A2 expression in the database.

Notes: The valid gene Affymetrix ID is: 207015_s_at (ALDH1A2). (A) Survival curves are plotted for all patients (n=593), HR =1.13 (95% CI: 0.91–1.41). (B) Survival curves are plotted for intestinal type (n=186), HR =1.47 (95% CI: 0.99–2.19). (C) Survival curves are plotted for diffuse type (n=106), HR =0.59 (95% CI: 0.36–0.97).
Abbreviations: HR, hazard ratio; CI, confidence interval.
Figure 2 The prognostic value of ALDH1A2 expression in the database.

shows the prognostic role of mRNA expression of ALDH1A3 in the database. The valid gene Affymetrix ID is: 203180_at (ALDH1A3). The curves show that mRNA expression of ALDH1A3 above or below the median do not separate the cases into significantly different prognostic groups in all patients with GC, HR =1.19 (95% CI: 0.97–1.46), P=0.1 (). However, ALDH1A3 mRNA high expression was found to be significantly correlated with worsened OS either in intestinal-type patients, HR =2.24 (95% CI: 1.44–3.49), P=0.00026 () or diffuse-type patients, HR =1.91 (95% CI: 1.02–3.59), P=0.04 ().

Figure 3 The prognostic value of ALDH1A3 expression in the database.

Notes: The valid gene Affymetrix ID is: 203180_at (ALDH1A3). (A) Survival curves are plotted for all patients (n=593), HR =1.19 (95% CI: 0.97–1.46). (B) Survival curves are plotted for intestinal type (n=186), HR =2.24 (95% CI: 1.44–3.49). (C) Survival curves are plotted for diffuse type (n=106), HR =1.91 (95% CI: 1.02–3.59).
Abbreviations: HR, hazard ratio; CI, confidence interval.
Figure 3 The prognostic value of ALDH1A3 expression in the database.

shows the prognostic role of mRNA expression of ALDH1B1 in the database. The valid gene Affymetrix ID is: 209646_x_at (ALDH1B1). ALDH1B1 mRNA high expression was found to be significantly correlated with better OS for all patients with GC, HR =0.66 (95% CI: 0.53–0.81), P=7.8e–05 (). In addition, ALDH1B1 mRNA high expression was also found to be correlated with better OS in intestinal-type patients, HR =0.7 (95% CI: 0.48–1.02), P=0.06 (), but not in diffuse-type patients, HR =1.41 (95% CI: 0.82–2.41), P=0.21 ().

Figure 4 The prognostic value of ALDH1B1 expression in the database.

Notes: The valid gene Affymetrix ID is: 209646_x_at (ALDH1B1). (A) Survival curves are plotted for all patients (n=593), HR =0.66 (95% CI: 0.53–0.81). (B) Survival curves are plotted for intestinal type (n=186), HR =0.7 (95% CI: 0.48–1.02). (C) Survival curves are plotted for diffuse type (n=106), HR =1.41 (95% CI: 0.82–2.41).
Abbreviations: HR, hazard ratio; CI, confidence interval.
Figure 4 The prognostic value of ALDH1B1 expression in the database.

Next, we examined the prognostic role of mRNA expression of ALDH1L1 in the database. The valid gene Affymetrix ID is 205208_at (ALDH1L1). ALDH1L1 mRNA high expression was found to be significantly correlated with worsened OS for all patients with GC, HR =1.23 (95% CI: 1–1.51), P=0.048 (). In addition, ALDH1L1 mRNA high expression was also found to be correlated with worsened OS in intestinal-type patients, HR =1.44 (95% CI: 0.97–2.16), P=0.072 (). In contrast, ALDH1L1 mRNA high expression was found to be significantly correlated with better OS in diffuse-type patients, HR =0.5 (95% CI: 0.31–0.83), P=0.0064 ().

Figure 5 The prognostic value of ALDH1L1 expression in the database.

Notes: The valid gene Affymetrix ID is: 205208_at (ALDH1L1). (A) Survival curves are plotted for all patients (n=593), HR =1.23 (95% CI: 1–1.51). (B) Survival curves are plotted for intestinal type (n=186), HR =1.44 (95% CI: 0.97–2.16). (C) Survival curves are plotted for diffuse type (n=106), HR =0.5 (95% CI: 0.31–0.83).
Abbreviations: HR, hazard ratio; CI, confidence interval.
Figure 5 The prognostic value of ALDH1L1 expression in the database.

For further determination of the correlation of individual ALDH1 isoenzymes with other clinicopathological factors, we determined the correlation with pathological grades (), clinical grades (), HER2 status (), and different choices of treatment () of patients with GC. From , it is found that, except for ALDH1A1, other ALDH1 isoenzymes’ mRNA high expression is significantly associated with pathological grades. From , it is found that all the individuals with ALDH1 mRNA high expression are significantly associated with clinical stages of patients with GC. From , it is found that ALDH1A1 and ALDH1A2 mRNA high expressions are only significantly associated with patients with HER2-negative GC. ALDH1B1 mRNA high expression is only associated with patients with HER2-positive GC. ALDH1A3 and ALDH1L1 mRNA high expressions are significantly associated with patients with HER2-negative and HER2-positive GC. From , it is found that with the exception of ALDH1A2, other ALDH1 isoenzymes’ mRNA high expression is significantly associated with different choice of treatment.

Table 2 Correlation of ALDH1 isoenzyme mRNA high expression with pathological grades of patients with GC

Table 3 Correlation of ALDH1 isoenzyme mRNA high expression with clinical stages of patients with GC

Table 4 Correlation of ALDH1 isoenzyme mRNA high expression with HER2 status of patients with GC

Table 5 Correlation of ALDH1 isoenzyme mRNA high expression with different treatments of patients with GC

Discussion

Even though ALDH1A1 was first identified as a marker and a characteristic feature of primitive human hematopoietic stem cells isolated from bone marrowCitation32 and of neural SCs,Citation33,Citation34 studies have reported that other isoenzymes of ALDH1 (ie, ALDH1A2 and ALDH1A3) are also involved, because Aldh1A1 deficiency also did not affect Aldefluor staining of hematopoietic cells.Citation35 It is believed that Aldh1A1 is not a critical regulator of adult SC function or Aldefluor staining in mice, since Aldh1A1 deficiency did not affect the function of SCs from the adult central or peripheral nervous systems. Therefore, this heterogeneity indicates that the other isoforms of ALDH1 are responsible for Aldefluor activity in normal SCs, as well as in CSCs. We hypothesis that individual isoenzymes of ALDH1 may also differently affect the outcome of patients with GC. In the current study, we found that mRNA high expression of ALDH1A1 was not significantly correlated with OS for all patients with GC followed for 13 years, HR =0.86 (95% CI: 0.7–1.05), P=0.13. In addition, ALDH1A1 mRNA high expression was not found to be correlated with OS in intestinal-type patients, HR =0.72 (95% CI: 0.49–1.04), P=0.078, and in diffuse-type patients, HR =1.52 (95% CI: 0.87–2.66), P=0.13. Similar to ALDH1A1 mRNA, ALDH1A2 mRNA high expression was also not significantly correlated with OS for all patients with GC, HR =1.13 (95% CI: 0.91–1.41), P=0.25. However, ALDH1A2 mRNA high expression was significantly correlated with better OS in diffuse-type patients, HR =0.59 (95% CI: 0.36–0.97), P=0.037. In contrast, ALDH1A3 mRNA high expression was found to be significantly correlated with worsened OS either in intestinal-type patients, HR =2.24 (95% CI: 1.44–3.49), P=0.00026 or diffuse-type patients, HR=1.91 (95% CI: 1.02–3.59), P=0.04. Interestingly, ALDH1B1 mRNA high expression was found to be significantly correlated with better OS for all patients with GC, HR =0.66 (95% CI: 0.53–0.81), P=7.8e−05, and mRNA high expression of ALDH1L1 was found to be significantly correlated with worsened OS for all patients with GC, HR =1.23 (95% CI: 1–1.51), P=0.048. ALDH1L2 is expressed in heart, brain, liver, kidney, and pancreas using real-time polymerase chain reaction performed on an array of human tissues, but no information is available for its expression in gastric tissue.Citation36 No survival information for ALDH1L2 in patients with GC is available, probably due to its low expression in gastric tissue and GC. We also assessed the correlation of individual ALDH1 isoenzymes’ mRNA high expression with other clinicopathological features, such as pathological grades, clinical grades, HER2 status, and different choices of treatment of patients with GC. Prognostic values of the ALDH1 in several cancers have been accumulated predominantly by using immunohistochemistry of paraffin-embedded cancer tissues with isotype-specific antibodies, ALDH1A1 or ALDH1A3.Citation37 Meta-analysis showed that ALDH1 has a poor prognosis in breast cancer,Citation38,Citation39 colorectal cancer,Citation40 lung cancer,Citation41,Citation42 and head and neck cancer.Citation43 In contrast to the abovementioned reports, ALDH1 is considered a marker of prediction of better prognosis in patients suffering from primary glioblastoma.Citation44 So far, only a few studies showed the prognostic values of the mRNA expression of ALDH1 isoenzymes in patients with cancer. Liu et alCitation45 reported that higher ALDH1A1 mRNA level was associated with improved disease-free survival (HR =0.87, 95% CI: 0.80–0.95, per log unit change) and OS (HR =0.85, 95% CI: 0.78–0.93 per log unit change) independent of age at diagnosis, TNM stage, and treatment in triple-negative breast cancer. Chen et al reveal that ALDH1L1 mRNA is significantly reduced in hepatocellular carcinoma tissues and is a new and potential prognostic marker for the survival of patients with hepatocellular carcinoma. However, the exact mechanisms of ALDH1 isoenzymes, in either protein or mRNA levels, which may affect the clinical outcome of patients with cancer are still not clear and need further study. In addition, individual ALDH1 isoenzymes may have interaction among them and finally affect the outcome of patients with GC. Unfortunately, the KM plotter is not able to analyze the correlation between the various isoforms of ALDH1. In addition, the KM plotter cannot be used to determine a positive or negative correlation between isoenzyme expressions.

ALDH1 is able to convert aldehydes into carboxylic acids in several types of normal tissues.Citation46,Citation47 Recently, accumulating evidence strongly indicates that ALDH1, in particular ALDH1A1, can modulate cell differentiation, proliferation, and survival, as well as the cellular response to oxidative stress in SCs.Citation37 ALDH1 also has universal markers in CSCs including gastric CSC. However, the specific usefulness of ALDH1 in SCs and CSCs is still unclear. Currently, the activity of ALDH1 in viable cells can be determined by the use of fluorescent substrates and flow cytometry for ALDH1.Citation10,Citation48,Citation49 Katsuno et alCitation50 isolated ALDH1+ cells from human diffuse-type gastric carcinoma cells and characterized these cells using an Aldefluor assay. They found that ALDH1+ cells that constituted 5%–8% of the human diffuse-type GC cells were more tumurigenic than ALDH1− cells, and ALDH1+ cells were able to self-renew and generate heterogeneous cell populations. Wakamatsu et alCitation12 immunohistochemically examined expression and distribution of ALDH1 in primary and metastatic GC and showed that the ALDH1 positivity is significantly higher in diffuse-type lymph node metastasis than in the primary tumor. Levi et alCitation13 also observed that ALDH1 was expressed in very low levels in normal human gastric mucosa but significantly increased in gastric adenocarcinomas. Until recently, Li et alCitation14 determined that ALDH1A1 was an independent prognostic factor for both OS and RFS. However, which ones of ALDH1’s isoenzymes are causing ALDH1 activity in GC and the prognostic values of most of the individual ALDH1 isoenzyme in GC remains elusive. Our results showed that unlike breast cancer, mRNA expression of ALDH1A1 in GC is not significantly associated with OS for patients with GC. Additionally, our study results also indicate that ALDH1A3 and ALDH1L1 are potential major contributors to the ALDH1 activity in GC, since ALDH1A3 and ALDH1L1 mRNA high expression was found to be significantly correlated with worsened OS for all patients with GC. Based on our results, ALDH1A3 and ALDH1L1 are potential excellent drug targets for patients with GC.

Previous reports have been focusing on the correlation between ALDH1A1 protein and the clinicopathologic parameters. In most types of tumors, such as, breast cancer,Citation10,Citation51,Citation52 clear cell renal cell carcinoma,Citation53 colorectal carcinoma,Citation54 esophageal squamous cell carcinoma,Citation55 squamous cell carcinoma of the head and neck,Citation56 and urothelial carcinomas of urinary bladder,Citation57 ALDH1A1 protein high expression was correlated with tumor metastasis and poor prognosis. In contrast to the abovementioned studies, ALDH1A1 is also identified as a marker of astrocytic differentiation during brain development and of better prognosis in patients suffering from primary glioblastoma.Citation44 In patients with GC who had ALDH1A1 overexpression, they also had poor OS and shorter RFS.Citation14 In the current study, ALDH1A1 mRNA high expression was found to be correlated with worsened OS only in diffuse-type patients with GC, but not in intestinal-type patients with GC.

The two main histologic subtypes of the disease, intestinal and diffuse type, define two distinct entities that have different etiology, pathogenesis, epidemiology, and behavior.Citation58 In the current study, excerpt for the ALDH1A3 mRNA high expression that was found to be correlated with worsened OS in both intestinal-type patients and diffuse-type patients, other ALDH1 isoenzymes had total different OS in these two types of patients with GC. The molecular mechanisms of the regulation of ALDH1 isoenzymes in intestinal and diffuse type need to be further investigated.

The HER2/neu proto-oncogene (also known as c-erbB-2) encodes for a 185 kDa transmembrane glycoprotein receptor known as HER2/neu or p185HER2, partial homology with epidermal growth factor receptor, shares with that receptor-intrinsic tyrosine kinase activity, and has been implicated in cancer with special emphasis on breast cancer.Citation59,Citation60 HER2 overexpression was detected in 6%–35% of patients with GC and has led to the advent of targeted therapy with anti-HER2 antibody such as Trastuzumab which has improved the OS.Citation61,Citation62 HER2 and ALDH1 have been identified as potential biomarkers of prognostic significance in patients with GC;Citation63 however, there are no reports about the association between HER2 and ALDH1 in GC. Interestingly, there are strong evidences showing the correlation between HER2 and ALDH1 in breast cancer. ALDH1 expression was found to be correlated with HER2 overexpression (P<0.001) in breast cancer.Citation64 ALDH1+ breast cancers were also found to be associated with basal-like and HER2-overexpressing subtypes, and the characteristics histologic features were related to these two subtypes.Citation65 In this study, we found that ALDH1A1 and ALDH1A2 mRNA high expression is only significantly associated with patients with HER2-negative GC. ALDH1B1 mRNA high expression is only associated with patients with HER2-positive GC. ALDH1A3 and ALDH1L1 mRNA high expression are significantly associated with patients with HER2-negative and HER2-positive GC.

In patients with breast cancer, only ALDH1A1 mRNA high expression was found to be significantly correlated with the poor OS, indicating that ALDH1A1 is potentially a major contributor of ALDH1 activity and a potential drug target of breast cancer.Citation26 In contrast, in non-small-cell lung cancer, high expression of ALDH1A2 and ALDH1B1 mRNA was found to be significantly correlated with the poor OS in patients with non-small-cell lung cancer, indicating that ALDH1A2 and ALDH1B1 are potential drug targets for patients with non-small-cell lung cancer.Citation66 It is not clear about the role of each ALDH1 isoenzyme that contributes to ALDH1 activity in GC cells. It will be helpful to know which ALDH1 isoenzyme contributes to ALDH1 activity, if we measure the changes of ALDH1 activity upon using siRNAs or antibodies of individual ALDH1 isoenzymes in GC cells. Unlike breast and non-small-cell lung cancer, only ALDH1A3 and ALDH1L1 mRNA high expression was found to be significantly correlated with worsened OS for all patients with GC, indicating that ALDH1A3 and ALDH1L1 might be potential drug targets for patients with GC. So far, not many specific small molecular inhibitors or other antagonists of the different ALDH1 isozymes have been developed. This lack of selectivity of available individual ALDH1 isozyme inhibitors that have been tested as anticancer agents in the clinical setting has resulted in an unacceptable side-effect profile.Citation37 Interestingly, Condello et alCitation67 recently developed A37 ((ethyl-2-((4-oxo-3-(3-(pryrrolidin-1-yl)propyl)-3,4-dihydrobenzo [4,5]thioeno [3,2-d]pyrimidin-2-yl)thio)acetate)), a novel ALDH1A1 small-molecule enzymatic inhibitor for the first time, where it disrupted ovarian cancer cell spheroid formation and cell viability (P<0.001). We expect more specific inhibitors target other ALDH1 isozymes, such as ALDH1A3 or ALDH1L1 to be developed and to be validated for their usage in the targeting CSC.

Conclusion

Using KM plotter, we identified the distinct prognostic significances of ALDH1 isoenzymes in patients with GC. Our results indicate that ALDH1A3 and ALDH1L1 are potential major contributors to the ALDH1 activity in GC, since ALDH1A3 and ALDH1L1 mRNA high expression was found to be significantly correlated with worsened OS for all patients with GC. ALDH1A3 and ALDH1L1 are potential prognostic markers and therapeutic targets for patients with GC.

Disclosure

The authors report no conflicts of interest in this work.

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