A Novel Deletion/Insertion Caused by a Replication Error in the β-Globin Gene Locus Control Region

Abstract

Deletions in the β-globin locus control region (β-LCR) lead to (εγδβ)⁰-thalassemia [(εγδβ)⁰-thal]. In patients suffering from these rare deletions, a normal hemoglobin (Hb), phenotype is found, contrasting with a hematological thalassemic phenotype. Multiplex-ligation probe amplification (MLPA) is an efficient tool to detect β-LCR deletions combined with long-range polymerase chain reaction (PCR) and DNA sequencing to pinpoint deletion breakpoints. We present here a novel 11,155 bp β-LCR deletion found in a French Caucasian patient which removes DNase I hypersensitive site 2 (HS2) to HS4 of the β-LCR. Interestingly, a 197 bp insertion of two inverted sequences issued from the HS2-HS3 inter-region is present and suggests a complex rearrangement during replication. Carriers of this type of thalassemia can be misdiagnosed as an α-thal trait. Consequently, a complete α- and β-globin gene cluster analysis is required to prevent a potentially damaging misdiagnosis in genetic counselling.

• (εγδβ)⁰-Thalassemia [(εγδβ)⁰-Thal]
• β-Locus control region (β-LCR)
• Deletion
• Insertion
• Multiplex-ligation probe amplification (MLPA)