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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 28, 2017 - Issue 1
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Mitogenome Announcement

The complete chloroplast genome sequence of Perilla citriodora (Makino) Nakai

Ji-Su MoDepartment of Agricultural Biotechnology, Genomics Division, Crop Genomics Laboratory, National Academy of Agricultural Science, RDA, Republic of Korea,
,
Kyunghee KimDepartment of Plant Science, Plant Genomics and Breeding Institute, and Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea, ;Phyzen Genomics Institute, 501-1, Gwanak Century Tower, Gwanak-Gu, Seoul, Republic of Korea,
,
Myoung Hee LeeLegume and Oil Crop Research Division, National Institute of Crop Science, RDA, Republic of Korea, and
,
Jeong-Hee LeeSEEDERS, Daeduk Industry-Academic Cooperation Building, Yuseong-Gu, Daejeon, Republic of Korea
,
Ung-Han YoonDepartment of Agricultural Biotechnology, Genomics Division, Crop Genomics Laboratory, National Academy of Agricultural Science, RDA, Republic of Korea,
&
Tae-Ho KimDepartment of Agricultural Biotechnology, Genomics Division, Crop Genomics Laboratory, National Academy of Agricultural Science, RDA, Republic of Korea, Correspondence[email protected]
Pages 131-132 | Received 30 Sep 2015, Accepted 19 Oct 2015, Published online: 03 Mar 2016
 
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Abstract

Perilla citriodora is a diploid and an aromatic herb species belonging to the family Lamiaceae and widely distributed in East Asia. The complete chloroplast genome sequence of P. citriodora was generated by de novo assembly using whole genome next-generation sequences. The assembled chloroplast genome of P. citriodora was 152 588 bp in length and structurally divided into four distinct regions; large single copy region (83 699 bp), small single copy region (17 537 bp), and a pair of inverted repeat regions (25 676  bp). A total of 115 genes were annotated including 81 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic relationship with previously reported chloroplast genomes revealed that P. citriodora is most closely related to P. frutescens, a tetraploid Perilla species.

Declaration of interest

This work was carried out with the support of National Agricultural Genome Program (PJ010408) of RDA, Korea.

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