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Original Articles

Whole-genome sequencing of a large collection of Myroides odoratimimus and Myroides odoratus isolates and antimicrobial susceptibility studies

, , , , , , & show all
Pages 1-8 | Received 21 Oct 2017, Accepted 25 Feb 2018, Published online: 04 Apr 2018

References

  • StutzerMJZur Frage Über die Fäulnisbakterien im DarmZentralbl Bakteriol Parasitenkd Infektionskr Hyg Abt I Orig192391 87 90
  • StutzerMKwaschninaAAussaaten aus dem Fäzes des Menschen gelbe Kolonien bildende Bakterien (Gattung Flavobacterium u. a.)Zentralbl Bakteriol Parasitenkd Infektionskr Hyg Abt I Orig1929113219225
  • VancanneytMReclassification of Flavobacterium odoratum (Stutzer 1929) strains to a new genus, Myroides, as Myroides odoratus comb. nov. and Myroides odoratimimus sp. novInt. J. Syst. Evol. Microbiol.199646926932
  • InbakandanDMurthyPSVenkatesanRKhanSA16S rDNA sequence analysis of culturable marine biofilm forming bacteria from a ship’s hullBiofouling20102689389910.1080/08927014.2010.530347
  • JinFGenetic diversity and phylogeny of antagonistic bacteria against Phytophthora nicotianae isolated from tobacco rhizosphereInt. J. Mol. Sci.2011123055307110.3390/ijms120530553116175
  • BenedettiPRassuMPavanGSeftonAPellizzerGSeptic shock, pneumonia, and soft tissue infection due to Myroides odoratimimus: report of a case and review of Myroides infectionsInfection20113916116510.1007/s15010-010-0077-1
  • GreenBTGreenKNolanPEMyroides odoratus cellulitis and bacteremia: case report and reviewScand. J. Infect. Dis.20013393293410.1080/00365540110077065
  • HsuehPRWuJJHsiueTRHsiehWCBacteremic necrotizing fasciitis due to Flavobacterium odoratumClin. Infect. Dis.1995211337133810.1093/clinids/21.5.1337
  • Crum-CianfloneNFMatsonRWBallon-LandaGFatal case of necrotizing fasciitis due to Myroides odoratusInfection20144293193510.1007/s15010-014-0626-0
  • DeepaRVenkateshKGParveenJDBanuSTJayalakshmiGMyroides odoratus and Chryseobacterium indologenes: two rare isolates in the immunocompromisedIndian J. Med. Microbiol.20143232733010.4103/0255-0857.136592
  • MarakiSSarchianakiEBarbagadakisSMyroides odoratimimus soft tissue infection in an immunocompetent child following a pig bite: case report and literature reviewBraz. J. Infect. Dis.20121639039210.1016/j.bjid.2012.06.004
  • MacfarlaneDEBaum-ThureenPCrandonIFlavobacterium odoratum ventriculitis treated with intraventricular cefotaximeJ. Infect.19851123323810.1016/S0163-4453(85)93228-1
  • KtariSNosocomial outbreak of Myroides odoratimimus urinary tract infection in a Tunisian hospitalJ. Hosp. Infect.201280778110.1016/j.jhin.2011.09.010
  • YagciAMolecular typing of Myroides odoratimimus (Flavobacterium odoratum) urinary tract infections in a Turkish hospitalEur. J. Clin. Microbiol. Infect. Dis.20001973173210.1007/s100960070001
  • PrateekSGuptaPMittalGSinghAKFatal case of pericardial effusion due to Myroides odoratus: a rare case reportJ. Clin. Diagn. Res.20159DD01DD024668411
  • HolmesBSnellJJLapageSPFlavobacterium odoratum: a species resistant to a wide range of antimicrobial agentsJ. Clin. Pathol.197932737710.1136/jcp.32.1.731145571
  • HuSAntibiotic resistance mechanisms of Myroides spJ. Zhejiang Univ. Sci. B20161718819910.1631/jzus.B15000684794510
  • BachmeyerCCellulitis due to Myroides odoratimimus in a patient with alcoholic cirrhosisClin. Exp. Dermatol.2008339798
  • Endicott-YazdaniTRDhimanNBenavidesRSpakCWMyroides odoratimimus bacteremia in a diabetic patientProc. Bayl. Univ. Med. Cent.20152834234310.1080/08998280.2015.119292684462216
  • YoonJManeeratSKawaiFYokotaAMyroides pelagicus sp. nov., isolated from seawater in ThailandInt. J. Syst. Evol. Microbiol.2006561917192010.1099/ijs.0.64336-0
  • ZhangXYMyroides profundi sp. nov., isolated from deep-sea sediment of the southern Okinawa TroughFEMS Microbiol. Lett.200828710811210.1111/j.1574-6968.2008.01299.x
  • ChoSHChaeSHImWTKimSBMyroides marinus sp. nov., a member of the family Flavobacteriaceae, isolated from seawaterInt. J. Syst. Evol. Microbiol.20116193894110.1099/ijs.0.024067-0
  • YanSZhaoNZhangXHMyroides phaeus sp. nov., isolated from human saliva, and emended descriptions of the genus Myroides and the species Myroides profundi Zhang et al. 2009 and Myroides marinus Cho et al. 2011Int. J. Syst. Evol. Microbiol.20126277077510.1099/ijs.0.029215-0
  • TomovaAMyroides guanonis sp. nov., isolated from prehistoric paintingsInt. J. Syst. Evol. Microbiol.2013634266427010.1099/ijs.0.050831-0
  • ZhangZDHeLYHuangZShengXFMyroides xuanwuensis sp. nov., a mineral-weathering bacterium isolated from forest soilInt. J. Syst. Evol. Microbiol.20146462162410.1099/ijs.0.056739-0
  • PaekJMyroides injenensis sp. nov., a new member isolated from human urineAntonie van Leeuwenhoek201510720120710.1007/s10482-014-0317-y
  • RamHMyroides indicus sp. nov., isolated from garden soilInt. J. Syst. Evol. Microbiol.2015654008401210.1099/ijsem.0.000530
  • FraserSLJorgensenJHReappraisal of the antimicrobial susceptibilities of Chryseobacterium and Flavobacterium species and methods for reliable susceptibility testingAntimicrob. Agents Chemother.19974127382741164199
  • ChangJCAntimicrobial susceptibility of flavobacteria as determined by agar dilution and disk diffusion methodsAntimicrob. Agents Chemother.19974113011306163904
  • AliMJJosephJSharmaSNaikMNCanaliculitis with isolation of Myroides speciesOphthal. Plast. Reconstr. Surg.201533S24S2510.1097/IOP.0000000000000604
  • MammeriHBellaisSNordmannPChromosome-encoded beta-lactamases TUS-1 and MUS-1 from Myroides odoratus and Myroides odoratimimus (formerly Flavobacterium odoratum), new members of the lineage of molecular subclass B1 metalloenzymesAntimicrob. Agents Chemother.2002463561356710.1128/AAC.46.11.3561-3567.2002128705
  • AmblerRPThe structure of beta-lactamasesPhilos. Trans. R. Soc. Lond. B Biol. Sci.198028932133110.1098/rstb.1980.0049
  • GalleniMStandard numbering scheme for class B beta-lactamasesAntimicrob. Agents Chemother.20014566066310.1128/AAC.45.3.660-663.200190352
  • BushKJacobyGAUpdated functional classification of beta-lactamasesAntimicrob. Agents Chemother.20105496997610.1128/AAC.01009-09
  • DharneMSAntibacterial activities of multi drug resistant Myroides odoratimimus bacteria isolated from adult flesh flies (Diptera: Sarcophagidae) are independent of metallo beta-lactamase geneBraz. J. Microbiol.20083939740410.1590/S1517-838220080002000353768384
  • Al-BayssariCGuptaSKDabboussiFHamzeMRolainJMMUS-2, a novel variant of the chromosome-encoded beta-lactamase MUS-1, from Myroides odoratimimusNew Microbes New Infect.20157677110.1016/j.nmni.2015.06.0074522612
  • BebroneCCurrent challenges in antimicrobial chemotherapy: focus on ss-lactamase inhibitionDrugs20107065167910.2165/11318430-000000000-00000
  • KonoMSasatsuMMakinoKR-plasmid conferring resistance to ampicillin, carbenicillin and erythromycin in a Flavobacterium odoratum strainMicro. Lett.1980145558
  • KuaiSHuangLPeiHChenYLiuJImipenem resistance due to class A carbapenemase KPC-2 in a Flavobacterium odoratum isolateJ. Med. Microbiol.2011601408140910.1099/jmm.0.029660-0
  • SchröttnerPRudolphWWEingBRBertramSGunzerFComparison of VITEK2, MALDI-TOF MS, and 16S rDNA sequencing for identification of Myroides odoratus and Myroides odoratimimusDiagn. Microbiol. Infect. Dis.20147915515910.1016/j.diagmicrobio.2014.02.002
  • SchröttnerPGunzerFSchüppelJRudolphWWIdentification of rare bacterial pathogens by 16S rRNA gene sequencing and MALDI-TOF MSJ. Vis. Exp.2016113e53176
  • ZerbinoDRBirneyEVelvet: algorithms for de novo short read assembly using de Bruijn graphsGenome Res.20081882182910.1101/gr.074492.1072336801
  • ZankariEIdentification of acquired antimicrobial resistance genesJ. Antimicrob. Chemother.2012672640264410.1093/jac/dks2613468078
  • KumarSStecherGTamuraKMEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasetsMol. Biol. Evol.2016331870187410.1093/molbev/msw054