Advanced search
Publication Cover
Emerging Microbes & Infections Volume 7, 2018 - Issue 1
Submit an article Journal homepage
1,660
Views
28
CrossRef citations to date
0
Altmetric
Original Articles

The concordance between upper and lower respiratory microbiota in children with Mycoplasma pneumoniae pneumonia

Wenkui DaiDepartment of Computer ScienceCity University of Hong Kong999077Hong KongChina
,
Heping WangDepartment of Respiratory DiseasesShenzhen Children’s Hospital No. 7019, Yitian Road 518026Futian DistrictShenzhenChina
,
Qian ZhouDepartment of Microbial ResearchWeHealthGene Institute 3C19, No. 19 Building 518000Dayun Software TownShenzhenChina
,
Xin FengDepartment of Microbial ResearchWeHealthGene Institute 3C19, No. 19 Building 518000Dayun Software TownShenzhenChina
,
Zhiwei LuDepartment of Respiratory DiseasesShenzhen Children’s Hospital No. 7019, Yitian Road 518026Futian DistrictShenzhenChina
,
Dongfang LiDepartment of Microbial ResearchWeHealthGene Institute 3C19, No. 19 Building 518000Dayun Software TownShenzhenChina;Institute of StatisticsNanKai University No. 94 Weijin Road 300071TianjinChina
,
Zhenyu YangDepartment of Microbial ResearchWeHealthGene Institute 3C19, No. 19 Building 518000Dayun Software TownShenzhenChina
,
Yanhong LiuDepartment of Microbial ResearchWeHealthGene Institute 3C19, No. 19 Building 518000Dayun Software TownShenzhenChina
,
Yinhu LiDepartment of Microbial ResearchWeHealthGene Institute 3C19, No. 19 Building 518000Dayun Software TownShenzhenChina
,
Gan XieDepartment of Respiratory DiseasesShenzhen Children’s Hospital No. 7019, Yitian Road 518026Futian DistrictShenzhenChina
,
Kunling ShenDepartment of Respiratory DiseasesBeijing Children’s Hospital100045BeijingChina
,
Yonghong YangDepartment of Respiratory DiseasesShenzhen Children’s Hospital No. 7019, Yitian Road 518026Futian DistrictShenzhenChina
,
Yuejie ZhengDepartment of Respiratory DiseasesShenzhen Children’s Hospital No. 7019, Yitian Road 518026Futian DistrictShenzhenChinaCorrespondence[email protected]
&
Shuaicheng LiDepartment of Computer ScienceCity University of Hong Kong999077Hong KongChinaCorrespondence[email protected]
 show all
Pages 1-8 | Received 25 Jan 2018, Accepted 17 Apr 2018, Published online: 23 May 2018

References

  • ZhouYBiogeography of the ecosystems of the healthy human bodyGenome Biol.20131410.1186/gb-2013-14-1-r14054670
  • Human Microbiome Project C.Structure, function and diversity of the healthy human microbiomeNature2012486 207 21410.1038/nature11234
  • HasegawaKAssociation of nasopharyngeal microbiota profiles with bronchiolitis severity in infants hospitalised for bronchiolitisEur. Respir. J.2016481329133910.1183/13993003.00152-20165459592
  • de Steenhuijsen PitersWADysbiosis of upper respiratory tract microbiota in elderly pneumonia patientsISME J.2016109710810.1038/ismej.2015.99
  • HasegawaKNasal airway microbiota profile and severe bronchiolitis in infants: A case-control studyPediatr. Infect. Dis. J.2017361044105110.1097/INF.0000000000001500
  • QinQXuBaopingLiuXShenKStatus of Mycoplasma pneumoniae pneumonia in chinese children: A systematic reviewAdv. Microbiol.2014470471110.4236/aim.2014.411076
  • BassisCMAnalysis of the upper respiratory tract microbiotas as the source of the lung and gastric microbiotas in healthy individualsmBio20156e0003710.1128/mBio.00037-154358017
  • CharlsonESTopographical continuity of bacterial populations in the healthy human respiratory tractAm. J. Respir. Crit. Care Med.201118495796310.1164/rccm.201104-0655OC3208663
  • Meyer SauteurPMThe role of B cells in carriage and clearance of Mycoplasma pneumoniae from the respiratory tract of miceJ. Infect. Dis.201821729830910.1093/infdis/jix559
  • BrennanSGangellCWainwrightCSlyPDDisease surveillance using bronchoalveolar lavagePaediatr. Respir. Rev.2008915115910.1016/j.prrv.2008.01.002
  • AvitalAUwyyedKPicardEGodfreySSpringerCSensitivity and specificity of oropharyngeal suction versus bronchoalveolar lavage in identifying respiratory tract pathogens in children with chronic pulmonary infectionPediatr. Pulmonol.199520404310.1002/ppul.1950200108
  • HuangYJNasopharyngeal microbiota: Gatekeepers or fortune tellers of susceptibility to respiratory tract infections?Am. J. Respir. Crit. Care. Med.20171961504150510.1164/rccm.201707-1470ED
  • EspositoSPrincipiNImpact of nasopharyngeal microbiota on the development of respiratory tract diseasesEur. J. Clin. Microbiol. Infect. Dis.2018371710.1007/s10096-017-3076-7
  • TeoSMThe infant nasopharyngeal microbiome impacts severity of lower respiratory infection and risk of asthma developmentCell Host Microbe20151770471510.1016/j.chom.2015.03.0084433433
  • TanoKvon EssenRErikssonPOSjöstedtAAlloiococcus otitidis--otitis media pathogen or normal bacterial flora?APMIS200811678579010.1111/j.1600-0463.2008.01003.x
  • BiesbroekGSeven-valent pneumococcal conjugate vaccine and nasopharyngeal microbiota in healthy childrenEmerg. Infect. Dis.20142020121010.3201/eid2002.1312203901477
  • HasegawaKSerum cathelicidin, nasopharyngeal microbiota, and disease severity among infants hospitalized with bronchiolitisJ. Allergy Clin. Immunol.20171391383138610.1016/j.jaci.2016.09.037
  • BogaertDVariability and diversity of nasopharyngeal microbiota in children: A metagenomic analysisPLoS One20116e1703510.1371/journal.pone.00170353046172
  • ZaunmullerTEichertMRichterHUndenGVariations in the energy metabolism of biotechnologically relevant heterofermentative lactic acid bacteria during growth on sugars and organic acidsAppl. Microbiol. Biotechnol.20067242142910.1007/s00253-006-0514-3
  • SatoMThree CoA transferases involved in the production of short chain fatty acids in Porphyromonas gingivalisFront. Microbiol.20167114610.3389/fmicb.2016.011464949257
  • MillerSIErnstRKBaderMWLPS, TLR4 and infectious disease diversityNat. Rev. Microbiol.20053364610.1038/nrmicro1068
  • Prevaes S. M., et al. Concordance between upper and lower airway microbiota in infants with cystic fibrosis. Eur. Respir. J. 49, 1602235 (2017).
  • AATMBosch. Maturation of the infant respiratory microbiota, environmental drivers and health consequences a prospective cohort studyAm. J. Respir. Crit. Care Med.20171961582159010.1164/rccm.201703-0554OC
  • Al MasalmaMThe expansion of the microbiological spectrum of brain abscesses with use of multiple 16s ribosomal DNA sequencingClin. Infect. Dis.2009481169117810.1086/597578
  • PettigrewMMAssociation of sputum microbiota profiles with severity of community-acquired pneumonia in childrenBMC Infect. Dis.20161610.1186/s12879-016-1670-44939047
  • Lu Z., et al. The alteration of nasopharyngeal and oropharyngeal microbiota in children with MPP and non-MPP. Genes8, E380 (2017).
  • KozichJJWestcottSLBaxterNTHighlanderSKSchlossPDDevelopment of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the Miseq Illumina sequencing platformAppl. Environ. Microbiol.2013795112512010.1128/AEM.01043-133753973
  • CaporasoJGQiime allows analysis of high-throughput community sequencing dataNat. Methods2010733533610.1038/nmeth.f.3033156573
  • WangHMycoplasma pneumoniae and Streptococcus pneumoniae caused different microbial structure and correlation network in lung microbiotaJ. Thorac. Dis.201681316132210.21037/jtd.2016.04.634885968
  • KellyBJComposition and dynamics of the respiratory tract microbiome in intubated patientsMicrobiome2016410.1186/s40168-016-0151-84750361
  • YilmazPThe Silva and “All-species Living Tree Project (LTP)” taxonomic frameworksNucleic Acids Res.201442D643D64810.1093/nar/gkt1209

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.