References
- AllenMTPrusinkiewiczPDeJongTMUsing L-systems for modeling source-sink interactions, architecture and physiology of growing trees: The L-PEACH modelNew Phytol2005166386988010.1111/j.1469-8137.2005.01348.x
- BarthelemyDCaraglioYPlant architecture: A dynamic, multilevel and comprehensive approach to plant form, structure and ontogenyAnn Bot-London200799337540710.1093/aob/mcl260
- Bonabeau E (2001). Agent-based modeling: Methods and techniques for simulating human systems. Sackler Colloquium on Adaptive Agents, Intelligence, and Emergent Human Organization—Capturing Complexity through Agent-Based Modeling, 4–6 October, Irvine, California.
- Chelle M and Andrieu B (2006). Modelling the light environment of virtual crop canopies. Workshop on Functional-Structural Plant Modelling in Crop Production, Wageningen, Netherlands, 5–8 March.
- CournédeP-Hetal.Structural factorization of plants to compute their functional and architectural growthSimulation200682742743810.1177/0037549706069341
- CureJDIsraelDWRuftyTWNitrogen stress effects on growth and seed yield of nonnodulated soybean exposed to elevated carbon-dioxideCrop Sci198828467167710.2135/cropsci1988.0011183X002800040023x
- DingkuhnMetal.EcoMeristem, a model of morphogenesis and competition among sinks in rice. 2. Simulating genotype responses to phosphorus deficiencyFunct Plant Biol200633432533710.1071/FP05267
- DurandJBGuedonYCaraglioYCostesEAnalysis of the plant architecture via tree-structured statistical models: The hidden Markov tree modelsNew Phytol2005166381382510.1111/j.1469-8137.2005.01405.x
- ElnadiAHWater relations of beans and effects of water stress on growth and floweringExp Agr19695319520710.1017/S0014479700004440
- EricssonTEffects of varied nitrogen stress on growth and nutrition in 3 salix clonesPhysiol Plantarum198151442342910.1111/j.1399-3054.1981.tb05580.x
- EschenbachCEmergent properties modelled with the functional structural tree growth model ALMIS: Computer experiments on resource gain and useEcol Model2005186447048810.1016/j.ecolmodel.2005.02.013
- GenardMetal.Carbon allocation in fruit trees: From theory to modellingTrees-Struct Funct200822326928210.1007/s00468-007-0176-5
- GiffordRMBarrettDJLutzeJLSamarakoonABAgriculture and global change: Scaling direct carbon dioxide impacts and feedbacks through timeGlobal Change and Terrestrial Ecosystems1996229259
- GodinCCaraglioYA multiscale model of plant topological structuresJournal of Theoretical Biology199819114610.1006/jtbi.1997.0561
- GodinCSinoquetHFunctional-structural plant modellingNew Phytol2005166370570810.1111/j.1469-8137.2005.01445.x
- GodinMetal.Surface stress, kinetics, and structure of alkanethiol self-assembled monolayersLangmuir200420177090709610.1021/la030257l
- GrimmVetal.Pattern-oriented modeling of agent-based complex systems: Lessons from ecologyScience2005310575098799110.1126/science.1116681
- GuoYetal.Parameter optimization and field validation of the functional-structural model GREENLAB for maizeAnn Bot-London200697221723010.1093/aob/mcj033
- HolttaTetal.Modeling xylem and phloem water flows in trees according to cohesion theory and Munch hypothesisTrees-Struct Funct2006201677810.1007/s00468-005-0014-6
- HuntRColasantiRLSelf-assembling plants and integration across ecological scalesAnn Bot-London2007100367767810.1093/aob/mcm176
- JeffersDLShiblesRMSome effects of leaf area, solar radiation, air temperature, and variety on net photosynthesis in field-grown soybeansCrop Sci19699676276410.2135/cropsci1969.0011183X000900060027x
- KangMZEversJBVosJDe ReffyePThe derivation of sink functions of wheat organs using the GREENLAB modelAnn Bot-London200810181099110810.1093/aob/mcm212
- KarwowskiRPrusinkiewiczPThe L-system-based plant-modeling environment L-studio 4.0Proceedings of the 4th International Workshop on Functional-Structural Plant Models2004
- KurthWSome new formalisms for modelling the interaction between plant architecture, competition and carbon allocationBFÖ1998525398
- LeeK-HAkitaSFactors causing the variation in the temperature coefficient of dark respiration in rice (Oryza sativa L.)Plant Prod Sci200031384210.1626/pps.3.38
- LindenmayerAMathematical models for cellular interaction in development, Part I and Part IIJ Theor Biol196818328031510.1016/0022-5193(68)90079-9
- LuquetDetal.EcoMeristem, a model of morphogenesis and competition among sinks in rice. 1. Concept, validation and sensitivity analysisFunct Plant Biol200633430932310.1071/FP05266
- MarrCHuttMTTopology regulates pattern formation capacity of binary cellular automata on graphsPhys Stat Mech Appl200535464166210.1016/j.physa.2005.02.019
- MartinTOswaldOGrahamIAArabidopsis seedling growth, storage lipid mobilization, and photosynthetic gene expression are regulated by carbon: Nitrogen availabilityPlant Physiol2002128247248110.1104/pp.010475
- McCreeKJAn equation for the rate of respiration of white clover plants grown under controlled conditionsPrediction and Measurement of Photosynthetic Productivity Proceedings of the IBP/PP Technical Meeting1970
- MechRPrusinkiewiczPVisual models of plants interacting with their environmentSIGGRAPH ’96: Proceedings of the 23rd Annual Conference on Computer Graphics and Interactive Techniques1996397410
- MillerLNKramerPJEffects of water stress on growth of pine seedlingsPlant Physiol196540344010.1104/pp.40.3.569
- MinchinPEHLacointeANew understanding on phloem physiology and possible consequences for modelling long-distance carbon transportNew Phytol2005166377177910.1111/j.1469-8137.2005.01323.x
- MinchinPEHThorpeMRFarrarJFA simple mechanistic model of phloem transport which explains sink priorityJ Exp Bot19934426294795510.1093/jxb/44.5.947
- NichitiuCRemilaESimulations of graph automataProceedings of MFCS’98 Satellite Workshop on Cellular Automata1998330342
- ParsonsJAFonstadMAA cellular automata model of surface water flowHydrol Process200721162189219510.1002/hyp.6587
- PenningdevriesFWTCost of maintenance processes in plant-cellsAnn Bot-London1975391597792
- PreissJRobinsonNSpilatroSMcNamaraKStarch synthesis and its regulationRegulation of Carbon Partitioning in Photosynthetic Tissue. Proceeding of the Eighth Annual Symposium in Plant Physiology19985
- PrusinkiewiczPLAristidThe Algorithmic Beauty of Plants1990
- PrusinkiewiczPKarwowskiRMechRHananJL-studio/cpfg: A software system for modeling plantsInternational Workshop on Applications of Graph Transformations with Industrial Relevance (ACTIVE 99)1999
- QuHCetal.Automata-based L-grammar extraction from multiple images for virtual plants3rd International Conference on Bio-Inspired Computing—Theories and Applications2008
- RemansTetal.A central role for the nitrate transporter NRT2.1 in the integrated morphological and physiological responses of the root system to nitrogen limitation in ArabidopsisPlant Physiol2006140390992110.1104/pp.105.075721
- RitchieJTModel for predicting evaporation from a row crop with incomplete coverWater Resour Res1972851204121310.1029/WR008i005p01204
- RoomPMMailletteLHananJSModule and metamer dynamics and virtual plantsAdv Ecol Res19942510515710.1016/S0065-2504(08)60214-7
- RyanMGetal.Woody tissue maintenance respiration of 4 conifers in contrasting climatesOecologia1995101213314010.1007/BF00317276
- ScheibleWRetal.Accumulation of nitrate in the shoot acts as a signal to regulate shoot-root allocation in tobaccoPlant J199711467169110.1046/j.1365-313X.1997.11040671.x
- ScheibleWRetal.Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogenPlant Physiol200413612483249910.1104/pp.104.047019
- ScheideggerAEThe Physics of Flow through Porous Media1974
- TaizLEduardoZPlant Physiology2004
- ThornleyJHMModeling shoot: Root relations: The only way forward?Ann Bot-London19988116517110.1006/anbo.1997.0529
- ThornleyJJohnsonIPlant and Crop Modeling1990
- TrewavasAPlant intelligenceNaturwissenschaften200592940141310.1007/s00114-005-0014-9
- WassinkECStolwijkJAJEffects of light quality on plant growthAnnu Rev Plant Phys1956737340010.1146/annurev.pp.07.060156.002105
- YanHPKangMZDe ReffyePDingkuhnMA dynamic, architectural plant model simulating resource-dependent growthAnn Bot-London200493559160210.1093/aob/mch078
- ZhaoXetal.Simulation of inflorescences using dual-scale automaton modelChinese J Comput20032460608617