Partial Migration and Diel Movement Patterns in Puget Sound Coho Salmon

REFERENCES

• Allen , G. H. 1956 . Migration, distribution, and movement of Puget Sound Silver Salmon , Seattle : Doctoral dissertation. University of Washington .
   Google Scholar
• Allen , G. H. 1959 . Growth of marked Silver Salmon (Oncorhynchus kisutch) of the 1950 brood in Puget Sound . Transactions of the American Fisheries Society , 88 : 310 – 318 .
   Google Scholar
• Allen , G. H. 1966 . Ocean migration and distribution of fin-marked Coho Salmon . Journal of the Fisheries Research Board of Canada , 23 : 1043 – 1061 .
   Web of Science ®Google Scholar
• Allen , S. E. and Wolfe , M. A. 2013 . Hindcast of the timing of the spring phytoplankton bloom in the Strait of Georgia, 1968–2010 . Progress in Oceanography , 115 : 6 – 13 .
   Web of Science ®Google Scholar
• Anderson , M. J. 2001 . Permutation tests for univariate or multivariate analysis of variance and regression . Canadian Journal of Fisheries and Aquatic Sciences , 58 : 626 – 639 .
   Web of Science ®Google Scholar
• Anderson , M. J. 2006 . Distance-based tests for homogeneity of multivariate dispersions . Biometrics , 62 : 245 – 53 .
   PubMed Web of Science ®Google Scholar
• Andrews , K. S. , Levin , P. S. , Katz , S. L. , Farrer , D. , Gallucci , V. F. and Bargmann , G. 2007 . Acoustic monitoring of Sixgill Shark movements in Puget Sound: evidence for localized movement . Canadian Journal of Zoology , 85 : 1136 – 1143 .
   Web of Science ®Google Scholar
• Andrews , K. S. and Quinn , T. P. 2011 . Combining fishing and acoustic monitoring data to evaluate the distribution and movements of Spotted Ratfish Hydrolagus colliei . Marine Biology , 159 : 769 – 782 .
   Web of Science ®Google Scholar
• Baker , R. R. 1978 . The evolutionary ecology of animal migration , London : Hodder and Stoughton .
   Google Scholar
• Batschelet , E. 1981 . Circular statistics in biology , London : Academic Press .
   Google Scholar
• Beamish , R. J. , Sweeting , R. M. , Lange , K. L. , Noakes , D. J. , Preikshot , D. and Neville , C. M. 2010 . Early marine survival of Coho Salmon in the Strait of Georgia declines to very low levels . Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science [online serial] , 2 : 424 – 439 .
   Web of Science ®Google Scholar
• Beauchamp , D. A. and Duffy , E. J. 2011 . Stage-specific growth and survival during early marine life of Puget Sound Chinook Salmon in the context of temporal-spatial environmental conditions and trophic interactions , Seattle : Washington Cooperative Fish and Wildlife Research Unit, WACFWRU-11-01 . Available: www.coopunits.org/Washington/Research./ (July 2012)
   Google Scholar
• Beetz , J. L. 2009 . Marine survival of Coho Salmon (Oncorhynchus kisutch) in Washington State: characteristic patterns and their relationship to environmental and biological factors , Seattle : Master's thesis. University of Washington .
   Google Scholar
• Buckley , R. M. 1969 . Analysis of the Puget Sound sport fishery for resident Coho Salmon, Oncorhynchus kisutch (Walbaum) , Seattle : Master's thesis. University of Washington .
   Google Scholar
• Burns , R. E. 1985 . The shape and form of Puget Sound , Seattle : University of Washington Press .
   Google Scholar
• Candy , J. R. and Quinn , T. P. 1999 . Behavior of adult Chinook Salmon (Oncorhynchus tshawytscha) in British Columbia coastal waters determined from ultrasonic telemetry . Canadian Journal of Zoology , 77 : 1161 – 1169 .
   Web of Science ®Google Scholar
• Chamberlin , J. W. , Essington , T. E. , Ferguson , J. W. and Quinn , T. P. 2011a . The influence of hatchery rearing practices on salmon migratory behavior: is the tendency of Chinook Salmon to remain within Puget Sound affected by size and date of release? . Transactions of the American Fisheries Society , 140 : 1398 – 1408 .
   Web of Science ®Google Scholar
• Chamberlin , J. W. , Kagley , A. N. , Fresh , K. L. and Quinn , T. P. 2011b . Movements of yearling Chinook Salmon during the first summer in marine waters of Hood Canal, Washington . Transactions of the American Fisheries Society , 140 : 429 – 439 .
   Web of Science ®Google Scholar
• Chapman , B. B. , Brönmark , C. , Nilsson , J.-Å. and Hansson , L.-A. 2011 . The ecology and evolution of partial migration . Oikos , 120 : 1764 – 1775 .
   Web of Science ®Google Scholar
• Chapman , B. B. , Hulthén , K. , Brodersen , J. , Nilsson , P. A. , Skov , C. , Hansson , L. A. and Brönmark , C. 2012 . Partial migration in fishes: causes and consequences . Journal of Fish Biology ,
   Web of Science ®Google Scholar
• Chittenden , C. M. , Beamish , R. J. , Neville , C. M. , Sweeting , R. M. and McKinley , R. S. 2009 . The use of acoustic tags to determine the timing and location of the juvenile Coho Salmon migration out of the Strait of Georgia, Canada . Transactions of the American Fisheries Society , 138 : 1220 – 1225 .
   Web of Science ®Google Scholar
• Clark , C. W. and Levy , D. A. 1988 . Diel vertical migrations by juvenile Sockeye Salmon and the antipredation window . American Naturalist , 131 : 271 – 290 .
   Web of Science ®Google Scholar
• Dean , C. A. , Kassler , T. W. and Mendel , G. 2010 . Genetic identification of Brook Trout or Brook/Bull trout hybrids in Pataha Creek, WA . Washington Department of Fish and Wildlife , Available: http://wdfw.wa.gov/publications/01139/wdfw01139.pdf. (November 2012)
   Google Scholar
• Dingle , H. 1996 . Migration: the biology of life on the move , New York : Oxford University Press .
   Google Scholar
• Finlayson , D. P. 2005 . “ Combined bathymetry and topography of the Puget lowland, Washington State ” . Available: www.ocean.washington.edu/data/pugetsound./ (December 2011)
   Google Scholar
• Fresh , K. L. , Cardwell , R. D. and Koons , R. R. 1981 . “ Food habits of Pacific salmon, baitfish, and their potential competitors and predators in the marine waters of Washington, August 1978 to September 1979 ” . State of Washington Department of Fisheries, progress report 145, Olympia
   Google Scholar
• Haw , F. , Wendler , H. O. and Deschamps , G. 1967 . “ Development of Washington State salmon sport fishery through 1964 ” . Washington Department of Fisheries Research Bulletin 7
   Google Scholar
• Healey , M. C. 1991 . “ Life history of Chinook Salmon (Oncorhynchus tshawytscha) ” . In Pacific salmon life histories , Edited by: Groot , C. and Margolis , L. 311 – 394 . Vancouver : University of British Columba Press .
   Google Scholar
• Hendry , A. P. , Bohlin , T. , Jonsson , B. and Berg , O. K. 2004 . “ To sea or not to sea? Anadromy versus non-anadromy in salmonids ” . In Evolution illuminated , Edited by: Henry , A. P. and Stearns , S. 92 – 125 . New York : Oxford University Press .
   Google Scholar
• Jonsson , B. and Jonsson , N. 1993 . Partial migration: niche shift versus sexual maturation in fishes . Reviews in Fish Biology and Fisheries , 3 : 348 – 365 .
   Web of Science ®Google Scholar
• Kallio-Nyberg , I. , Peltonen , H. and Rita , H. 1999 . Effects of stock-specific and environmental factors on the feeding migration of Atlantic Salmon (Salmo salar) in the Baltic Sea . Canadian Journal of Fisheries and Aquatic Sciences , 861 : 853 – 861 .
   Google Scholar
• Kerr , L. A. , Cadrin , S. X. and Secor , D. H. 2010 . The role of spatial dynamics in the stability, resilience, and productivity of an estuarine fish population . Ecological Applications , 20 : 497 – 507 .
   PubMed Web of Science ®Google Scholar
• Kerr , L. A. , Secor , D. H. and Piccoli , P. M. 2009 . Partial migration of fishes as exemplified by the estuarine-dependent white perch . Fisheries , 34 : 114 – 123 .
   Web of Science ®Google Scholar
• Kirkness , W. 1948 . “ Food of the Chinook and Silver salmon of Puget Sound ” . Washington Department of Fisheries Annual Report 28-31
   Google Scholar
• Kokko , H. and López-Sepulcre , A. 2006 . From individual dispersal to species ranges: perspectives for a changing world . Science , 313 : 789 – 91 .
   PubMed Web of Science ®Google Scholar
• Kovach Computing Services . 2012 . Oriana Anglesey, Wales , , UK Available: www.kovcomp.com. (June 2012)
   Google Scholar
• Koyama , A. , Kavanagh , K. and Robinson , A. 2005 . Marine nitrogen in central Idaho riparian forests: evidence from stable isotopes . Canadian Journal of Fisheries and Aquatic Sciences , 62 : 518 – 526 .
   Web of Science ®Google Scholar
• Li , L. , Mackas , D. , Hunt , B. , Schweigert , J. , Pakhomov , E. , Perry , R. I. , Galbraith , M. and Pitcher , T. J. 2013 . Zooplankton communities in the Strait of Georgia, British Columbia, track large-scale climate forcing over the Pacific Ocean . Progress in Oceanography , 115 : 90 – 102 .
   Web of Science ®Google Scholar
• Melnychuk , M. C. and Walters , C. J. 2010 . Estimating detection probabilities of tagged fish migrating past fixed receiver stations using only local information . Canadian Journal of Fisheries and Aquatic Sciences , 67 : 641 – 658 .
   Web of Science ®Google Scholar
• Milne , D. J. and Ball , E. A. R. 1958 . The tagging of spring and Coho Salmon in the Strait of Georgia in 1956 . Fisheries Research Board of Canada Progress Reports of the Pacific Coast Stations , 111 : 14 – 18 .
   Google Scholar
• Moore , M. E. , Goetz , F. A. , Van Doornik , D. M. , Tezak , E. P. , Quinn , T. P. , Reyes-Tomassini , J. J. and Berejikian , B. A. 2010 . Early marine migration patterns of wild Coastal Cutthroat Trout (Oncorhynchus clarki clarki), steelhead trout (O. mykiss), and their hybrids . PloS ONE [online serial] , 5 : 1 – 10 .
   Web of Science ®Google Scholar
• Morales , J. M. , Moorcroft , P. R. , Matthiopoulos , J. , Frair , J. L. , Kie , J. G. , Powell , R. A. , Merrill , E. H. and Haydon , D. T. 2010 . Building the bridge between animal movement and population dynamics . Philosophical Transactions of the Royal Society of London Series B (Biological Sciences) , 365 : 2289 – 301 .
   PubMed Web of Science ®Google Scholar
• Moring , J. R. 1976 . Contributions of delayed release, pen-cultured Chinook Salmon to the sport fishery in Puget Sound, Washington . Progressive Fish-Culturist , 38 : 36 – 39 .
   Web of Science ®Google Scholar
• Nathan , R. , Getz , W. M. , Revilla , E. , Holyoak , M. , Kadmon , R. , Saltz , D. and Smouse , P. E. 2008 . A movement ecology paradigm for unifying organismal movement research . Proceedings of the National Academy of Sciences of the USA , 105 : 19052 – 19059 .
   PubMed Web of Science ®Google Scholar
• NOAA-ESRL (National Oceanic and Atmospheric Administration-Earth System Research Laboratory) . 2012 . “ NOAA solar calculator ” . Available: http://www.esrl.noaa.gov/gmd/grad/solcalc./ (January 2012)
   Google Scholar
• Northcote , T. G. 1992 . Migration and residency in stream salmonids—some ecological considerations and evolutionary consequences . Nordic Journal of Freshwater Research , 67 : 5 – 17 .
   Google Scholar
• Oksanen , J. , Blanchet , F. G. , Kindt , R. , Legendre , P. , Minchin , P. R. , O’Hara , R. B. , Simpson , G. L. , Solymos , P. , Stevens , H. H. and Wagner , H. 2011 . “ Vegan: community ecology package ” . Available: vegan.r-forge.r-project.org./ (May 2012)
   Google Scholar
• O’Neill , S. and West , J. 2009 . Marine distribution, life history traits, and the accumulation of polychlorinated biphenyls in Chinook Salmon from Puget Sound, Washington . Transactions of the American Fisheries Society , 138 : 616 – 632 .
   Web of Science ®Google Scholar
• Pearcy , W. G. , Nishiyama , T. , Fujii , T. and Masuda , K. 1984 . Diel variations in the feeding habits of Pacific salmon caught in gill nets during a 24-hour period in the Gulf of Alaska . U.S. National Marine Fisheries Service Fishery Bulletin , 82 : 391 – 399 .
   Web of Science ®Google Scholar
• Prakash , A. and Milne , D. J. 1958 . Food as a factor affecting the growth of Coho Salmon off the east and west coasts of Vancouver Island, British Columbia . Fisheries Research Board of Canada Progress Report of the Pacific Coast Stations , 112 : 7 – 9 .
   Google Scholar
• Pressey , R. T. 1953 . The sport fishery for salmon on Puget Sound . Washington Department of Fisheries Fisheries Research Papers , 1 : 33 – 48 .
   Google Scholar
• Purcell , M. , Mackey , G. , LaHood , E. , Huber , H. and Park , L. 2004 . Molecular methods for the genetic identification of salmonid prey from Pacific harbor seal (Phoca vitulina richardsi) scat . U.S. National Marine Fisheries Service Fishery Bulletin , 220 : 213 – 220 .
   Google Scholar
• Quinn , T. , Dickerson , B. and Vøllestad , L. A. 2005 . Marine survival and distribution patterns of two Puget Sound hatchery populations of Coho (Oncorhynchus kisutch) and Chinook (Oncorhynchus tshawytscha) Salmon . Fisheries Research , 76 : 209 – 220 .
   Web of Science ®Google Scholar
• Quinn , T. P. 1988 . Estimated swimming speeds of migrating adult Sockeye Salmon . Canadian Journal of Zoology , 66 : 2160 – 2163 .
   Web of Science ®Google Scholar
• Quinn , T. P. 2005 . The behavior and ecology of Pacific salmon and trout , Seattle : University of Washington Press .
   Google Scholar
• Quinn , T. P. and Brodeur , R. D. 1991 . Intra-specific variations in the movement patterns of marine animals . Integrative and Comparative Biology , 31 : 231 – 241 .
   Google Scholar
• Quinn , T. P. and Myers , K. W. 2005 . Anadromy and the marine migrations of Pacific salmon and trout: Rounsefell revisited . Reviews in Fish Biology and Fisheries , 14 : 421 – 442 .
   Web of Science ®Google Scholar
• R Development Core Team . 2012 . R: a language and environment for statistical computing , Vienna : R Foundation for Statistical Computing . Available: www.cran.r-project.org./ (June 2012)
   Google Scholar
• Reebs , S. G. 2002 . Plasticity of diel and circadian activity rhythms in fishes . Reviews in Fish Biology and Fisheries , 12 : 349 – 371 .
   Web of Science ®Google Scholar
• Rensel , J. E. , Harris , R. P. and Tynan , T. J. 1988 . Fishery contribution and spawning escapement of Coho Salmon reared in net-pens in southern Puget Sound, Washington . North American Journal of Fisheries Management , 8 : 359 – 366 .
   Google Scholar
• Rice , C. A. , Greene , C. M. , Moran , P. , Teel , D. J. , Kuligowski , D. R. , Reisenbichler , R. R. , Beamer , E. M. , Karr , J. R. and Fresh , K. L. 2011 . Abundance, stock origin, and length of marked and unmarked juvenile Chinook Salmon in the surface waters of greater Puget Sound . Transactions of the American Fisheries Society , 140 : 170 – 189 .
   Web of Science ®Google Scholar
• Robinson , R. A. , Crick , H. Q. P. , Learmonth , J. A. , Maclean , I. M. D. , Thomas , C. D. , Bairlein , F. , Forchhammer , M. C. , Francis , C. M. , Gill , J. A. , Godley , B. J. , Harwood , J. , Hays , G. C. , Huntley , B. , Hutson , A. M. , Pierce , G. J. , Rehfisch , M. M. , Sims , D. W. , Santos , M. B. , Sparks , T. H. , Stroud , D. A. and Visser , M. E. 2009 . Travelling through a warming world: climate change and migratory species . Endangered Species Research , 7 : 87 – 99 .
   Google Scholar
• Sandercock , F. K. 1991 . “ Life history of Coho Salmon (Oncorhynchus kisutch) ” . In Pacific salmon life histories , Edited by: Groot , C. and Margolis , L. 394 – 445 . Vancouver : University of British Columbia Press .
   Google Scholar
• Scheuerell , M. D. and Schindler , D. E. 2003 . Diel vertical migration by juvenile Sockeye Salmon: empirical evidence for the antipredation window . Ecology , 84 : 1713 – 1720 .
   Web of Science ®Google Scholar
• Secor , D. 1999 . Specifying divergent migrations in the concept of stock: the contingent hypothesis . Fisheries Research , 43 : 13 – 34 .
   Web of Science ®Google Scholar
• Secor , D. H. , Rooker , J. R. , Zlokovitz , E. and Zdanowicz , V. S. 2001 . Identification of riverine, estuarine, and coastal contingents of Hudson River Striped Bass based upon otolith elemental fingerprints . Marine Ecology Progress Series , 211 : 245 – 253 .
   Web of Science ®Google Scholar
• Simenstad , C. A. , Fresh , K. A. and Salo , E. O. 1982 . “ The role of Puget Sound and Washington coastal estuaries in the life history of Pacific salmon: an unappreciated function ” . In Estuarine comparisons , Edited by: Kennedy , V. 343 – 364 . New York : Academic Press .
   Google Scholar
• Skov , C. , Baktoft , H. , Brodersen , J. , Brönmark , C. , Chapman , B. B. , Hansson , L.-A. and Nilsson , P. A. 2011 . Sizing up your enemy: individual predation vulnerability predicts migratory probability . Proceedings of the Royal Society B (Biological Sciences) , 278 : 1414 – 1418 .
   PubMed Web of Science ®Google Scholar
• Sound Data Management . 2008 . “ Hydra—the hydrophone data repository ” . Available: http://hydra.sounddatamanagement.com./ (July 2011)
   Google Scholar
• Tsukamoto , K. and Arai , T. 2001 . Facultative catadromy of the eel Anguilla japonica between freshwater and seawater habitats . Marine Ecology Progress Series , 220 : 265 – 276 .
   Web of Science ®Google Scholar
• USDA-NRCS (U.S. Department of Agriculture-Natural Resources Conservation Service), U.S. Geological Survey, and U.S. Environmental Protection Agency . 2004 . “ Watershed boundary dataset for Washington State ” . Available: http://datagateway.nrcs.usda.gov/. (June 2012)
   Google Scholar
• Van Doornik , D. , Teel , D. , Kuligowski , D. , Morgan , C. and Casillas , E. 2007 . Genetic analyses provide insight into the early ocean stock distribution and survival of juvenile Coho Salmon off the coasts of Washington and Oregon . North American Journal of Fisheries Management , 27 : 220 – 237 .
   Web of Science ®Google Scholar
• VEMCO . 2013 . “ 69-kHz sea water range calculator ” . Available: http://www.vemco.com/education/range.php. (January 2013)
   Google Scholar
• Walker , R. V. , Myers , K. W. , Davis , N. D. , Aydin , K. Y. , Friedland , K. D. , Carlson , H. R. , Boehlert , G. W. , Urawa , S. , Ueno , Y. and Anma , G. 2000 . Diurnal variation in thermal environment experienced by salmonids in the North Pacific as indicated by data storage tags . Fisheries Oceanography , 9 : 171 – 186 .
   Web of Science ®Google Scholar
• Washington State Department of Ecology . 2012 . “ Washington State base map ” . Available: http://www.ecy.wa.gov/services/gis/data/data.htm. (December 2011)
   Google Scholar
• Weitkamp , L. 2012 . “ Marine distributions of Coho and Chinook salmon inferred from coded wire tag recoveries ” . In Advances in fish tagging and marking technology , Edited by: McKenzie , J. R. , Parsons , B. , Seitz , A. C. , Kopf , R. K. , Mesa , M. G. and Phelps , Q. 191 – 214 . Bethesda , , Maryland : American Fisheries Society, Symposium 76 .
   Google Scholar
• Weitkamp , L. and Neely , K. 2002 . Coho Salmon (Oncorhynchus kisutch) ocean migration patterns: insight from marine coded-wire tag recoveries . Canadian Journal of Fisheries and Aquatic Sciences , 59 : 1100 – 1115 .
   Web of Science ®Google Scholar
• Welch , D. W. , Boehlert , G. W. and Ward , B. R. 2003 . POST–the Pacific Ocean salmon tracking project . Oceanologica Acta , 25 : 243 – 253 .
   Google Scholar
• Williams , G. D. , Andrews , K. S. , Katz , S. L. , Moser , M. L. , Tolimieri , N. , Farrer , D. A. and Levin , P. S. 2012 . Scale and pattern of Broadnose Sevengill Shark Notorynchus cepedianus movement in estuarine embayments . Journal of Fish Biology , 80 : 1380 – 1400 .
   PubMed Web of Science ®Google Scholar
• Wingate , R. L. , Secor , D. H. and Kraus , R. T. 2011 . Seasonal patterns of movement and residency by Striped Bass within a subestuary of the Chesapeake Bay . Transactions of the American Fisheries Society , 140 : 1441 – 1450 .
   Web of Science ®Google Scholar