Determination of Polymer Molecular Weight and Gyration Radius of DNA by Capillary Electrophoresis

REFERENCES

• Ambler , M. R. , and R. D. Mate . 1972 . Comparison of number–average molecular weights calculated by GPC and membrane osmometry . J. Poly. Sci. Pol. Chem. 10 ( 9 ): 2677 – 2689 .
   Web of Science ®Google Scholar
• Cheng , Y.-Q. , B. Yao , H.-D. Zhang , J. Fang , and Q. Fang . 2010 . An automated capillary electrophoresis system for high-speed separation of DNA fragments based on a short capillary . Electrophoresis 31 ( 19 ): 3184 – 3191 .
   PubMed Web of Science ®Google Scholar
• Dolnik , V. , W. A. Gursk , and A. Padua . 2001 . Capillary electrophoretic separation of uncharged polymers using polyelectrolyte engines: Theoretical model . Electrophoresis 22 ( 4 ): 692 – 698 .
   PubMed Web of Science ®Google Scholar
• Haynes , R. D. , R. J. Meagher , and A. E. Barron . 2011 . A chemically synthesized peptoid-based drag-tag enhances free-solution DNA sequencing by capillary electrophoresis . Peptide Sci. 96 ( 5 ): 702 – 707 .
   Google Scholar
• Hjertèn , S. 1985 . High-performance electrophoresis: Elimination of electroendosmosis and solute adsorption . J. Chromatogr. A. 347 : 191 – 198 .
   Web of Science ®Google Scholar
• Kurata , M. , Y. Tsunashima , J. Brandup , and E. H. Immergut . 1989 . Polymer Handbook , eds. J. Brandup , E. H. Immergut , and E. A. Grulke . New York , NY : Wiley .
   Google Scholar
• Latulippe , D. R. , and A. L. Zydney . 2010 . Radius of gyration of plasmid DNA isoforms from static light scattering . Biotechnol. Bioeng. 107 ( 1 ): 134 – 142 .
   PubMed Web of Science ®Google Scholar
• Li , K. , X. Song , and D. Zhang . 2008 . Molecular weight evaluation of depolymerized poly(ethylene terephthalate) using intrinsic viscosity . J. Appl. Polym. Sci. 109 : 1294 – 1297 .
   Web of Science ®Google Scholar
• Liu , C. Y. , X. Xu , Q. Wang , and J. R. Chen . 2007 . Chen. Mathematical model for DNA separation by capillary electrophoresis in entangled polymer solutions . J. Chromatogr. A. 1142 : 222 – 230 .
   PubMed Web of Science ®Google Scholar
• Lobanov , M. Y. , N. S. Bogatyreva , and O. V. Galzitskaya . 2008 . Radius of gyration as an indicator of protein structure compactness . Mol. Biol. 42 ( 4 ): 701 – 706 .
   PubMed Web of Science ®Google Scholar
• McCormick , L. C. , G. W. Slater , A. E. Karger , W. N. Vreeland , A. E. Barron , C. Desruisseaux , and G. Drouin . 2001 . Capillary electrophoretic separation of uncharged polymers using polyelectrolyte engines: Theoretical model . J. Chromatogr. A. 924 ( 1–2 ): 43 – 52 .
   PubMed Web of Science ®Google Scholar
• Morão , A. M. , J. C. Nunes , F. Sousa , M. T. P. de Amorim , I. C. Escobar , and J. A. Queiroz . 2011 . Ultrafiltration of supercoiled plasmid DNA: modeling and application . J. Membr. Sci. 378 : 280 – 289 .
   Web of Science ®Google Scholar
• Murugaiah , V. , L. R. Lima , and R. E. Synovec . 1994 . Hyphenated Techniques in Polymer Characterization: Thermal-Spectroscopic and Other Methods , eds. T. Provder , M. W. Urban , and H. G. Barth , Washington , DC .
   Google Scholar
• Netopilik , M. 2001 . Theoretical and practical problems in characterizing polymers with extremely narrow molecular-weight distribution by SEC with dual detection . Int. J. Polym. Anal. Ch. 6 ( 3–4 ): 349 – 363 .
   Web of Science ®Google Scholar
• Odijk , T. 1995 . Stiff chains and filaments under tension . Macromolecules 28 : 7016 – 7018 .
   Web of Science ®Google Scholar
• Ogston , A. G. 1958. The spaces in a uniform random suspension of fibers. J. Trans Faraday Soc. 54: 1754–1757.
   Google Scholar
• Quesada , M. A. 1997 . Replaceable polymers in DNA sequencing by capillary electrophoresis . Curr. Opin. Biotechnol. 8 ( 1 ): 82 – 93 .
   PubMed Web of Science ®Google Scholar
• Schriemer , D. C. , and L. Li . 1996 . Detection of high molecular weight narrow polydisperse up to 1.5 million Daltons by MALDI mass spectrometry . Anal. Chem. 68 ( 17 ): 2721 – 2725 .
   PubMed Web of Science ®Google Scholar
• Shin , S.-H. , G. W. Shin , S.-H. Yim , S.-H. Jung , G. Y. Jung , and Y. -J. Chung . 2011 . Strategy for high-fidelity multiplex DNA copy number assay system using capillary electrophoresis devices . Electrophoresis 32 ( 14 ): 1837 – 1843 .
   PubMed Web of Science ®Google Scholar
• Slater , G. W. , and J. Noolandi . 1989 . The biased reptation model of DNA gel electrophoresis: mobility vs molecular size and gel concentration . Biopolymers 28 ( 10 ): 1781 – 1791 .
   PubMed Web of Science ®Google Scholar
• Vega , J. R. , and G. R. Meira . 2001 . SEC of simple polymers with molar mass detection in presence of instrumental broadening computer simulation study on the calculation of unbiased molecular weight distributions . J. Liq. Chromatogra. R. T. 24 ( 7 ): 901 – 919 .
   Web of Science ®Google Scholar
• Wang , H. S. , and X. K. Kou 2002 . Polymer chemistry course . Beijing : Science Press .
   Google Scholar
• Wang , R. , H. Xie , Y.-B. Xu , Z.-P. Jia , X.-D. Meng , J.-H. Zhang , J. Ma , J. Wang , and X.-H. Wang . 2012 . Study on detection of mutation DNA fragment in gastric cancer by restriction endonuclease fingerprinting with capillary electrophoresis . Biomed. Chromatogra. 26 ( 3 ): 393 – 399 .
   PubMed Web of Science ®Google Scholar
• Xu , Z. Q. , T. Esumi , N. Ikuta , and T. Hirokawa . 2009 . High-sensitive analysis of DNA fragments by capillary gel electrophoresis using transient isotachophoresis preconcentration and fluorescence detection . J. Chromatogr. A. 1216 ( 7 ): 3602 – 3605 .
   PubMedGoogle Scholar
• Zhang , J. Z. , Y. Fang , and J. Y. Hou . 1995 . Use of non-cross-linked polyacrylamide for four-color DNA sequencing by capillary electrophoresis separation of fragments up to 640 bases in length in two hours . Anal. Chem. 67 ( 24 ): 4589 – 4593 .
   PubMed Web of Science ®Google Scholar
• Zimm , B. H. 1991 . “Lakes-Straits” model of field-inversion electrophoresis of DNA . J. Chem. Phys. 94 : 2187 – 2206 .
   Web of Science ®Google Scholar