Extraction and Enzymatic Assay of Glucose in Soils with Contrasting pH, Clay, and Organic Carbon Contents

References

• Ameloot, N., P. Maenhout, S. De Neve, and S. Sleutel. 2016. Biochar-induced N2O emission reductions after field incorporation in a loam soil. Geoderma 267:10–16. doi:10.1016/j.geoderma.2015.12.016.
   Web of Science ®Google Scholar
• Andersen, C., F. Eiland, and F. P. Vinther. 1983. Ecological investigations of the soil microflora and fauna in agricultural ecosystems with reduced cultivation, spring barley and catch crop. Danish Journal of Plant and Soil Science 87:257–96. (in Danish with English summary).
   Google Scholar
• Anderson, J. P. E., and K. H. Domsch. 1978. A physiological method for the quantitative measurement of microbial biomass in soils. Soil Biology and Biochemistry 27:433–38.
   Google Scholar
• Armbruster, D. A., and T. Pry. 2008. Limit of blank, limit of detection and limit of quantitation. The Clinical Biochemist Reviews 29:S49–S52.
   PubMedGoogle Scholar
• Baldock, J. A., and J. M. Oades. 1989. Effect of electrolyte concentration on glucose decomposition in soil. Soil Biology and Biochemistry 10:215–21.
   Google Scholar
• Baldock, J. A., and J. O. Skjemstad. 2000. Role of the soil matrix and minerals in protecting natural organic materials against biological attack. Organic Geochemistry 31:697–710. doi:10.1016/S0146-6380(00)00049-8.
   Web of Science ®Google Scholar
• Bankar, S. B., M. V. Bule, R. S. Singhal, and L. Ananthanarayan. 2009. Glucose oxidase – An overview. Biotechnology Advances 27:489–501. doi:10.1016/j.biotechadv.2009.04.003.
   PubMed Web of Science ®Google Scholar
• Boavida, M. J., and R. G. Wetzel. 1998. Inhibition of phosphatase activity by dissolved humic substances and hydrolytic reaction by natural ultraviolet light. Freshwater Biology 40:285–93. doi:10.1046/j.1365-2427.1998.00349.x.
   Web of Science ®Google Scholar
• Boddy, E., P. W. Hill, J. Farrar, and D. L. Jones. 2007. Fast turnover of low molecular weight components of the dissolved organic carbon pool of temperate grassland field soils. Soil Biology and Biochemistry 39:827–35. doi:10.1016/j.soilbio.2006.09.030.
   Web of Science ®Google Scholar
• Coody, P. N., L. E. Sommers, and D. W. Nelson. 1986. Kinetics of glucose uptake by soil microorganisms. Soil Biology and Biochemistry 18:283–89. doi:10.1016/0038-0717(86)90062-3.
   Web of Science ®Google Scholar
• Fischer, H., J. Ingwersen, and Y. Kuzyakov. 2010. Microbial uptake of low-molecular-weight organic substance out-competes sorption in soil. European Journal of Soil Science 61:504–13. doi:10.1111/j.1365-2389.2010.01244.x.
   Web of Science ®Google Scholar
• Forster, J. 1995. Determination of soil pH. In Methods in applied soil microbiology and biochemistry, ed. K. Alef and P. Nannipieri, 55. San Diego: Academic Press.
   Google Scholar
• Galant, A. L., R. C. Kaufman, and J. D. Wilson. 2015. Glucose: Detection and analysis. Food Chemistry 188:149–60. doi:10.1016/j.foodchem.2015.04.071.
   PubMed Web of Science ®Google Scholar
• Gee, G. W., and J. W. Bauder. 1986. Particle-size analysis. In Methods of soil analysis: Part 1 - Physical and mineralogical methods, ed. A. Klute, 383–411. Madison: American Society of Agronomy and Soil Science Society of America.
   Google Scholar
• Giesler, R., and U. Lundström. 1993. Soil solution chemistry: Effects of bulking soil samples. Soil Science Society of America Journal 57:1283–88. doi:10.2136/sssaj1993.03615995005700050020x.
   Web of Science ®Google Scholar
• Gunina, A., and Y. Kuzyakov. 2015. Sugars in soil and sweets for microorganisms: Review of origin, content, composition and fate. Soil Biology and Biochemistry 90:87–100. doi:10.1016/j.soilbio.2015.07.021.
   Web of Science ®Google Scholar
• Höper, H. 2006. Substrate-induced respiration. In Microbiological methods for assessing soil quality, ed. J. Bloem, D. W. Hopkin, and A. Benedetti, 84–92. Wallingford: CABI.
   Google Scholar
• ISO. 2009. Soil quality – Determination of particle size distribution in mineral soil material – Method by sieving and sedimentation. ISO 11277:2009. ISO International Organization of Standardization, Switzerland.
   Google Scholar
• Jagadamma, S., M. A. Mayes, J. R. Phillips, and Z. Zhou. 2012. Selective sorption of dissolved organic carbon compounds by temperate soils. PloS One 7:e50434. doi:10.1371/journal.pone.0050434.
   PubMed Web of Science ®Google Scholar
• Jones, D. L., and A. C. Edwards. 1998. Influence of sorption on the biological utilization of two simple carbon substrates. Soil Biology and Biochemistry 30:1895–902. doi:10.1016/S0038-0717(98)00060-1.
   Web of Science ®Google Scholar
• Jørgensen, N. O. G., and R. E. Jensen. 1994. Microbial fluxes of free monosaccharides and total carbohydrates in freshwater determined by PAD-HPLC. FEMS Microbiology Ecology 14:79–94. doi:10.1016/0168-6496(94)90084-1.
   Web of Science ®Google Scholar
• Kapustka, L. A., A. E. Annala, and W. C. Swanson. 1981. The peroxidase-glucose oxidase system: A new method to determine glucose liberated by carbohydrate degrading soil enzymes. Plant and Soil 63:487–90. doi:10.1007/BF02370048.
   Web of Science ®Google Scholar
• Kemmitt, S. J., D. Wright, K. W. T. Goulding, and D. L. Jones. 2006. pH regulation of carbon and nitrogen dynamics in two agricultural soils. Soil Biology and Biochemistry 38:898–911. doi:10.1016/j.soilbio.2005.08.006.
   Web of Science ®Google Scholar
• Knadel, M., A. Thomsen, and M. H. Greve. 2011. Multisensor on-the-go mapping of soil organic carbon content. Soil Science Society of America Journal 75:1799–806. doi:10.2136/sssaj2010.0452.
   Web of Science ®Google Scholar
• Kunst, A., B. Draeger, and J. Ziegenhorn. 1984. Carbohydrates, U.V. method with hexokinase and glucose-6-phosphate dehydrogenase. In Methods of enzymatic analysis, Metabolites 1, ed. H. U. Bergmeyer, Vol. VI, 3rd ed., 163–72. Basel: Verlag Chemie.
   Google Scholar
• Kuzyakov, Y., and D. L. Jones. 2006. Glucose uptake by maize roots and its transformation in the rhizosphere. Soil Biology and Biochemistry 38:851–60. doi:10.1016/j.soilbio.2005.07.012.
   Web of Science ®Google Scholar
• Liang, Z., L. Elsgaard, M. H. Nicolaisen, A. Lyhne-Kjærbye, and J. E. Olesen. 2018. Carbon mineralization and microbial activity in agricultural topsoil and subsoil as regulated by root nitrogen and recalcitrant carbon concentrations. Plant and Soil 433:65–82. doi:10.1007/s11104-018-3826-z.
   Web of Science ®Google Scholar
• Liang, Z., J. E. Olesen, J. L. Jensen, and L. Elsgaard. 2019. Nutrient availability affects carbon turnover and microbial physiology differently in topsoil and subsoil under a temperate grassland. Geoderma 336:22–30. doi:10.1016/j.geoderma.2018.08.021.
   Web of Science ®Google Scholar
• Liu, Q., Y. H. Zhang, and J. S. Lasowski. 2000. The adsorption of polysaccharides onto mineral surfaces: An acid/base interaction. International Journal of Mineral Processing 60:229–45. doi:10.1016/S0301-7516(00)00018-1.
   Web of Science ®Google Scholar
• Mašek, O., W. Buss, A. Roy-Poirier, W. Lowe, C. Peters, P. Brownsort, D. Mignard, C. Pritchard, and S. Sohi. 2018. Consistency of biochar properties over time and production scales: A characterisation of standard materials. Journal of Analytical and Applied Pyrolysis 132:200–10. doi:10.1016/j.jaap.2018.02.020.
   Web of Science ®Google Scholar
• Mazzei, P., H. Oschkinat, and A. Piccolo. 2013. Reduced activity of alkaline phosphatase due to host-guest interactions with humic superstructures. Chemosphere 93:1972–79. doi:10.1016/j.chemosphere.2013.07.015.
   PubMed Web of Science ®Google Scholar
• McRae, G., and C. M. Monreal. 2011. LC-MS/MS quantitative analysis of reducing carbohydrates in soil solutions extracted from crop rhizospheres. Analytical and Bioanalytical Chemistry 400:2205–15. doi:10.1007/s00216-011-4940-4.
   PubMed Web of Science ®Google Scholar
• Manage, L. P. S., S. Katuwal, T. Norgaard, M. Knadel, P. Moldrup, L. W. de Jonge, and M. H. Greve. 2019. Estimating soil particle density using visible near-infrared spectroscopy and a simple, two-compartment pedotransfer function. Soil Science Society of America Journal 83:37–47. doi:10.2136/sssaj2018.06.0217.
   Web of Science ®Google Scholar
• Nambu, K., P. A. W. van Hees, D. L. Jones, S. Vinogradoff, and U. S. Lundström. 2008. Composition of organic solutes and respiration in soils derived from alkaline and non-alkaline parent materials. Geoderma 144:468–77. doi:10.1016/j.geoderma.2007.12.014.
   Web of Science ®Google Scholar
• Nelson, D. W., and L. E. Sommers. 1996. Total carbon, organic carbon, and organic matter. In Methods of soil analysis, Part 3, ed. D. L. Sparks, A. L. Page, P. A. Helmke, R. H. Loeppert, P. N. Soltanpour, M. A. Tabatabai, C. T. Johnston and M. E. Sumner, 961–1010. 2nd ed. Madison: American Society of Agronomy and Soil Science Society of America.
   Google Scholar
• Nguyen, C., and A. Guckert. 2001. Short-term utilization of 14C-[U]glucose by soil microorganisms in relation to carbon availability. Soil Biology and Biochemistry 33:53–60. doi:10.1016/S0038-0717(00)00114-0.
   Web of Science ®Google Scholar
• Obour, P. B., T. Keller, M. Lamandé, and L. J. Munkholm. 2019. Pore structure characteristics and soil workability along a clay gradient. Geoderma 337:1186–95. doi:10.1016/j.geoderma.2018.11.032.
   Web of Science ®Google Scholar
• Olsson, R., R. Giesler, and P. Persson. 2011. Adsorption mechanisms of glucose in aqueous goethite suspensions. Journal of Colloid and Interface Science 35:263–68. doi:10.1016/j.jcis.2010.09.023.
   Web of Science ®Google Scholar
• Picek, T., M. Šimek, and H. Šantrůčková. 2000. Microbial responses to fluctuation of soil aeration status and redox conditions. Biology and Fertility of Soils 31:315–22. doi:10.1007/s003740050662.
   Web of Science ®Google Scholar
• R Core Team. 2019. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org/. Last accessed 20. July 2019.
   Google Scholar
• Reischke, S., M. G. K. Kumar, and E. Bååth. 2015. Threshold concentration of glucose for bacterial growth in soil. Soil Biology and Biochemistry 80:218–23. doi:10.1016/j.soilbio.2014.10.012.
   Web of Science ®Google Scholar
• Rubæk, G. H. 2008. Long-term effects of liming and phosphorus fertilisation on soil properties. In Long-term field experiments - a unique research platform. Proceedings of NJF Seminar 407, Askov Experimental Station and Sandbjerg Estate, B. T. Christensen, J. Petersen, and M. Schacht ed., Vol. 137, 56–59. 16-18 June Denmark: DJF Plant Science.
   Google Scholar
• Russell, A. D., and I. Chopra. 1996. Understanding antibacterial action and resistance. 2nd ed. London: Ellis Horwood.
   Google Scholar
• Sagoo, S. K., R. Board, and S. Roller. 2002. Chitosan potentiates the antimicrobial action of sodium benzoate on spoil-age yeasts. Letters in Applied Microbiology 34:168–72. doi:10.1046/j.1472-765x.2002.01067.x.
   PubMed Web of Science ®Google Scholar
• Sigma-Aldrich. 2019. Technical bulletin, Glucose (GO) Assay Kit, Product code GAGO-20. accessed, 10. December 2019, https://www.sigmaaldrich.com/content/dam/sigma-aldrich/docs/Sigma/Bulletin/gago20bul.pdf
   Google Scholar
• Stenström, J., B. Stenberg, and M. Johansson. 1998. Kinetics of substrate-induced respiration (SIR): Theory. Ambio 27:35–39.
   Web of Science ®Google Scholar
• van Hees, P. A. W., E. Johansson, and D. L. Jones. 2008. Dynamics of simple carbon compounds in two forest soils as revealed by soil solution concentrations and biodegradation kinetics. Plant and Soil 310:11–23. doi:10.1007/s11104-008-9623-3.
   Web of Science ®Google Scholar
• van Hees, P. A. W., D. L. Jones, R. Finlay, D. L. Godbold, and U. S. Lundström. 2005. The carbon we do not see - the impact of low molecular weight compounds on carbon dynamics and respiration in forest soils: A review. Soil Biology and Biochemistry 37:1–13. doi:10.1016/j.soilbio.2004.06.010.
   Web of Science ®Google Scholar
• Zar, J. H. 2010. Biostatistical analysis. 5th ed. Upper Saddle River, New Jersey: Prentice Hall, Inc
   Google Scholar