132
Views
33
CrossRef citations to date
0
Altmetric
Molecular Evolution

Phylogenetic relationships among the pine stem rust fungi (Cronartium and Peridermium spp.)

&
Pages 244-257 | Accepted 15 Oct 1997, Published online: 28 Aug 2018

LITERATURE CITED

  • Arthur, J. C. 1934. Manual of the rusts in United States and Canada. Purdue Research Foundation, Lafayette, Indiana. 438 pp.
  • Arthur, J. C., and G. B. Cummins. 1962. Manual of the rusts in United States and Canada, with a new supplement. Hafner Publishing Company, New York. 438 + 24 pp.
  • Blasdale, W. C. 1919. A preliminary list of the Uredinales of California. Univ. Calif. Publ. Bot. 7: 101–157.
  • Burdsall, H. H., and G. A. Snow. 1977. Taxonomy of Cronartium quercuum and C. fusiforme. Mycologia 69: 503–508.
  • Christenson, J. A. 1969. Cytology of albino Peridermium harknessii. Mycologia 61: 398–401.
  • Epstein, L., and M. B. Buurlage. 1988. Nuclear division in germinating aeciospores and its taxonomic significance for the western gall rust fungus, Peridermium harknessii. Mycologia 80: 235–240.
  • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach to using the bootstrap. Evolution 39: 783–791.
  • Felsenstein, J.. 1994. PHYLIP: Phylogeny Inference Package, Version 3.572. Computer program distributed by the author and the University of Washington, Seattle.
  • Gardes, M., and T. D. Bruns. 1993. ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts. Mol. Ecol. 2: 113–118.
  • Gyllensten, U. B., and H. A. Erlich. 1988. Generation of single stranded DNA by the polymerase chain reaction and its application to direct sequencing of the HLA-DQA locus. Proc. Natl. Acad. Sci. U.S.A. 85: 7652–7656.
  • Harkness, H. W., and J. P. Moore. 1880. Catalogue of the Pacific Coast fungi. Calif. Acad. Sci., San Francisco, California, unnum. rep. 46 pp.
  • Hawksworth, F. G., C. S. Dixon, and R. G. Krebill. 1983. Peridermium bethelii: a rust associated with lodgepole pine dwarf misdetoe. Pl. Dis. 67: 729–733.
  • Hedgcock, G. G. 1913. Notes on some western Uredineae which attack forest trees. II. Phytopathology 3: 15–17.
  • Kais, A. G., and C. H. Walkinshaw. 1964. White-spored strain of Cronartium fusiforme. Pl. Dis. Rep. 48: 686.
  • Kaneko, S., E. G. Kuhlman, and H. R. Powers. 1991. Morphological and physiological differences in the Cronartium quercuum complex. Pp. 69–75. In: Rusts of pine: Proceedings of the IUFRO Working Party Confi, Sept. 1989, Banff, Alberta. Eds., Y. Hiratsuka, J. K. Samoil, P. V. Blenis, P. E. Crane, and B. L. Laishley. Forestry Canada, Northern Forestry Centre, Info. Rep. NOR-X-317, Edmonton, Alberta. 408 pp.
  • Krebill, R. G. 1968. Histology of canker rusts in pines. Phytopathology 58: 155–164.
  • LoBuglio, K. F., J. I. Pitt, and J. W. Taylor. 1993. Phylogenetic analysis of two ribosomal DNA regions indicates multiple independent losses of a sexual Talaromyces state among asexual Penicillium species in subgenus Biverticillium. Mycologia 85: 592–604.
  • LoBuglio, K. F., J. I. Pitt, and J. W. Taylor. 1994. Independent origins of the synnematous Penicillium species. P. duclauxii, P. clavigerum, and P. vulpinum, as assessed by two ribosomal DNA regions. Mycol. Res. 98: 250–256.
  • McCabe, P. C. 1990. Production of single-stranded DNA by asymmetric PCR. Pp. 76–83. In: PCR protocols: a guide to methods and applications. Eds., M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White. Academic Press, Inc., San Diego, California. 482 pp.
  • Meinecke, E. P. 1916a. Peridermium Harknessii and Cronartium (Quercuum. Phytopathology 6: 225–240.
  • Meinecke, E. P.. 1916b. Peridermium harknessii and Cronartium quercuum. Science 43: 75.
  • Meinecke, E. P.. 1920. Facultative heteroecism in Peridermium cerebrum and Peridermium harknessii. Phytopathology 10: 279–297.
  • Mielke, J. L., and R. S. Peterson. 1967. Albino Peridermium harknessii in ponderosa pine. Pl. Dis. Rep. 51: 306–309.
  • Moricca, S., T. Kasuga, K. Mitchelson, A. Ragazzi, and S. Diamandis. 1996. Heterogeneity in intergenic regions of the ribosomal repeat of the pine-blister rusts Cronartium flaccidum and Peridermium pini. Curr. Genet. 29: 388–394.
  • O'Donnell, K. 1992. Ribosomal DNA internal transcribed spacers are highly divergent in the phytopathogenic ascomycete Fusarium sambucinum (Gibberella pulicaris). Curr. Genet. 22: 213–220.
  • Peterson, R. S. 1967. The Peridermium species on pine stems. Bull. Torrey Bot. Club 94: 511–542.
  • Peterson, R. S.. 1968. Limb rust of pine: the causal fungi. Phytopathology 58: 309–315.
  • Peterson, R. S.. 1973. Studies of Cronartium (Uredinales). Rep. Tottori Mycol. Inst. 10: 203–223.
  • Peterson, R. S., and F. F. Jewell. 1968. Status of American stem rusts of pine. Annual Rev. Phytopathol. 6: 23–40.
  • Peterson, R. S., and F. F. Jewell, and R. G. Shurtleff. 1965. Mycelium of limb rust fungi. Amer. J. Bot. 52: 519–525.
  • Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406–425.
  • Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. U.S.A. 74: 5463–5467.
  • Savile, D. B. O. 1968. Some fungal parasites of Scrophulariaceae. Canad. J. Bot. 46: 461–471.
  • Swofford, D. L. 1993. PAUP, phylogenetic analysis using parsimony, Version 3.1.1. Computer program distributed by the Smithsonian Institution, Washington, D. C.
  • Tuskan, G. A., and J. A. Walla. 1989. Isozyme characterization of Peridermium harknessii and Cronartium quercuum f. sp. banksianae using starch gel electrophoresis. Phytopathology 79: 444–448.
  • Vogler, D. R. 1995. Uses of molecular techniques in rust systematics. Pp. 9–15. In: Proc. 4th IUFRO Rusts of Pines Working Party Confi Eds., S. Kaneko, K. Katsuya, M. Kakishima, and Y Ono. Forestry and Forest Products Research Institute, and University of Tsukuba, Tsukuba, Japan. 197 pp.
  • Vogler, D. R., and T. D. Bruns. 1993. Use of molecular characters to identify holomorphs: an example from the rust genus Cronartium. Pp. 237–245. In: The fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematics. Eds., D. R. Reynolds and J. W. Taylor. CAB International, Wallingford, U.K. 375 pp.
  • Vogler, D. R., and T. D. Bruns, F. W. Cobb, Jr., and L. Epstein. 1989. Nuclei in mature aeciospores from two zymodemes of Peridermium harknessii in California (Abstr.). Phytopathology 79: 1164.
  • Vogler, D. R., and T. D. Bruns, F. W. Cobb, Jr., and L. Epstein, B. W. Geils, and D. L. Nelson. 1996. Isozyme diversity among hard pine stem rust fungi in the western United States. Canad. J. Bot. 74: 1058–1070.
  • Vogler, D. R., and T. D. Bruns, F. W. Cobb, Jr., and L. Epstein, B. W. Geils, and D. L. Nelson, L. Epstein, and F. W. Cobb, Jr. 1997. Nuclear behavior and evolution of two populations of the western gall rust fungus. Mycol. Res. 101: 791–797.
  • Vogler, D. R., and T. D. Bruns, F. W. Cobb, Jr., and L. Epstein, B. W. Geils, and D. L. Nelson, L. Epstein, and F. W. Cobb, Jr., B. B. Kinloch, F. W. Cobb, Jr., and T. L. Popenuck. 1991. Isozyme structure of Peridermium harknessii in the western United States. Canad. J. Bot. 69: 2434–2441.
  • Wagener, W. W. 1958. Infection tests with two rusts of Jeffrey pine. Pl. Dis. Rep. 42: 888–892.
  • Walla, J. A., G. A. Tuskan, and j. E. Lundquist. 1991. Comparison of white-and orange-spored Peridermium harknessii in native North Dakota Pinus ponderosa. Mycologia 83: 251–256.
  • White, T. J., T. Bruns, S. Lee, andj. Taylor. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pp. 315–322. In: PCR protocols: a guide to methods and applications. Eds., M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T.J. White. Academic Press, Inc., San Diego. 482 pp.
  • Wicker, E. F., and S. Yokota. 1976. On the Cronartium stem rusts of five-needle pines in Japan. Ann. Phytopathol. Soc. Japan 42: 187–191.
  • Yokota, S., and T. Uozumi. 1976. New developments in white pine blister rusts in Japan. Pp. 330–343. In: Proc. XVI IUFRO World Congr., Oslo, Norway. Norw. Forest Res. Inst., As, Norway.
  • Zambino, P. J., and L. J. Szabo. 1993. Phylogenetic relationships of selected cereal and grass rusts based on rDNA sequence analysis. Mycologia 85: 401–414.
  • Ziller, W. G. 1970. Studies of western tree rusts. VII. Inoculation experiments with pine stem rusts (Cronartium and Endocronartium). Canad. J. Bot. 48: 1313–1319.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.