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Molecular Evolution and Systematics

Gene flow analysis of molecular markers confirms that Phytophthora mirabilis and P. infestans are separate species

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Pages 796-810 | Accepted 29 Mar 1999, Published online: 04 Jun 2019

LITERATURE CITED

  • Bell GI, DeGennaro LJ, Gelfand DH, Bishop RJ, Valenzuela P, Rutter WJ. 1977. Ribosomal RNA genes of Saccharomyces cerevisiae. I. Physical map of the repeating unit and location of the regions coding for 5 S, 5.8 S, 18 S, and 25 S ribosomal RNAs. J Biol Chem 252: 8118–8125.
  • Carter DA, Archer SA, Buck KW, Shaw DS, Shattock RC. 1990. Restriction fragment length polymorphisms of mitochondrial DNA of Phytophthora infestans. Mycol Res 94: 1123–1128.
  • Caten CE, Jinks JL. 1968. Spontaneous variability of single isolates of Phytophthora infestans. I. Cultural variation. Can J Bot 46: 329–348.
  • Clinton GP. 1911. Oöspores of potato blight, Phytophthora infestans. Conn Agric Exp Sta Rep 1909–1910: 753–774.
  • Cooke DEL, Duncan JM. 1997. Phylogenetic analysis of Phytophthora species based on ITS1 and ITS2 sequences of the ribosomal RNA gene repeat. Mycol Res 101: 667–677.
  • Drenth A, Goodwin SB. 1998. Population structure: oomycetes. In: Worrall J, ed. Structure and dynamics of fungal populations. London, England: Chapman & Hall Limited. p 195–224.
  • Forbes GA, Goodwin SB, Drenth A, Oyarzun P, Ordoñez ME, Fry WE. 1998. A global marker database for Phytophthora infestans. Pl Dis 82: 811–818.
  • Fourton EE. 1962. Relaciones entre Phytophthora infestans (Mont.) de Bary y una forma especial de la misma aislada de la planta silvestre, Mirabilis jalapa L. [Tesis Lic], Mexico City, Mexico: Universidad Nacional Autonoma de Mexico. 31 p.
  • Galindo J, Hohl HR. 1985. Phytophthora mirabilis, a new species of Phytophthora. Sydowia 38: 87–96.
  • Goodwin SB. 1991. DNA polymorphisms in Phytophthora infestans: the Cornell experience. In: Lucas JA, Shattock RC, Shaw DS, Cooke LR, eds. Phytophthora. Cambridge, England: Cambridge University Press. p 256–271.
  • Goodwin SB. 1997. The population genetics of Phytophthora. Phytopathology 87: 462–473.
  • Goodwin SB., Cohen BA, Deahl KL, Fry WE. 1994. Migration from northern Mexico as the probable cause of recent genetic changes in populations of Phytophthora infestans in the United States and Canada. Phytopathology 84: 553–558.
  • Goodwin SB., Cohen BA, Deahl KL, Fry WE., Drenth A, Fry WE. 1992a. Cloning and genetic analyses of two highly polymorphic, moderately repetitive nuclear DNAs from Phytophthora infestans. Curr Genet 22: 107–115.
  • Goodwin SB., Cohen BA, Deahl KL, Fry WE., Drenth A, Fry WE., Fry WE. 1994. Genetic analyses of interspecific hybrids between Phytophthora infestans and Phytophthora mirabilis. Exp Mycol 18: 20–32.
  • Goodwin SB., Cohen BA, Deahl KL, Fry WE., Drenth A, Fry WE., Fry WE., Smart CD, Sandrock RW, Deahl KL, Punja ZK, Fry WE. 1998. Genetic change within populations of Phytophthora infestans in the United States and Canada during 1994 to 1996: role of migration and recombination. Phytopathology 88: 939–949.
  • Goodwin SB., Cohen BA, Deahl KL, Fry WE., Drenth A, Fry WE., Fry WE., Smart CD, Sandrock RW, Deahl KL, Punja ZK, Fry WE., Spielman LJ, Matuszak JM, Bergeron SN, Fry WE. 1992b. Clonal diversity and genetic differentiation of Phytophthora infestans populations in northern and central Mexico. Phytopathology 82: 955–961.
  • Goodwin SB., Cohen BA, Deahl KL, Fry WE., Drenth A, Fry WE., Fry WE., Smart CD, Sandrock RW, Deahl KL, Punja ZK, Fry WE., Spielman LJ, Matuszak JM, Bergeron SN, Fry WE., Sujkowski LS, Fry WE. 1996. Widespread distribution and probable origin of resistance to metalaxyl in clonal genotypes of Phytophthora infestans in the United States and western Canada. Phytopathology 86: 793–800.
  • Hillis DM. 1994. Homology in molecular biology. In: Hall BK, ed. Homology: the hierarchical basis of comparative biology. San Diego, California: Academic Press. p 339–368.
  • Ho HH. 1982. Affinity groups among plant pathogenic species of Phytophthora in culture. Mycopathologia 79: 141–146.
  • Judelson HS, Randall TA. 1998. Families of repeated DNA in the oomycete Phytophthora infestans and their distribution within the genus. Genome 41: 605–615.
  • Katsura K. 1976. Two new species of Phytophthora causing damping-off of cucumber and trunk rot of chestnut. Trans Mycol Soc Japan 17: 238–242.
  • Lee TY, Mizubuti E, Fry WE. 1999. Genetics of metalaxyl resistance in Phytophthora infestans. Fungal Genet Biol (In press).
  • Levy M, Correa-Victoria FJ, Zeigler RS, Xu S, Hamer JE. 1993. Genetic diversity of the rice blast fungus in a disease nursery in Colombia. Phytopathology 83: 1427–1433.
  • Luo L, Ho HH, Jong SC. 1988. Study on the physiological characteristics of the genus Phytophthora. Mycotaxon 32: 199–217.
  • Matuszak JM, Fernandez-Elquezabal J, Gu W-K, Villarreal-Gonzalez M, Fry WE. 1994. Sensitivity of Phytophthora infestans populations to metalaxyl in Mexico: distribution and dynamics. Pl Dis 78: 911–916.
  • Mayr E. 1963. Animal species and evolution. Cambridge, Massachusetts: Harvard University Press. 797 p.
  • Miller PM. 1955. V-8 juice agar as a general purpose medium for fungi and bacteria. Phytopathology 45: 461–462.
  • Möller EM, de Cock AWAM, Prell HH. 1993. Mitochondrial and nuclear DNA restriction enzyme analysis of the closely related Phytophthora species P. infestans, P. mirabilis, and P. phaseoli. J Phytopathol 139: 309–321.
  • Neel JV. 1973. “Private” genetic variants and the frequency of mutation among South American Indians. Proc Natl Acad Sci USA 70: 3311–3315.
  • Nei M, Li WK. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci USA 76: 5269–5273.
  • Newhook FJ, Waterhouse GM, Stamps DJ. 1978. Tabular key to the species of Phytophthora de Bary. Mycol Pap No. 143. Kew, England: Commonwealth Mycological Institute. 20 p.
  • Niederhauser JS. 1991. Phytophthora infestans: the Mexican connection. In: Lucas JA, Shattock RC, Shaw DS, Cooke LR, eds. Phytophthora. Cambridge, England: Cambridge University Press. p 25–45.
  • O'Donnell K, Cigelnik E, Nirenberg HI. 1998. Molecular systematics and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90: 465–493.
  • Porter AH. 1990. Testing nominal species boundaries using gene flow statistics: the taxonomy of two hybridizing admiral butterflies (Limenitis: Nymphalidae). Syst Zool 39: 131–147.
  • Rohlf FJ. 1989. NTSYS-pc: numerical taxonomy and multivariate analysis system, version 1.50. Setauket, New York: Exeter Publishing.
  • Servin L. 1958. Especie de Phytophthora atacando a Mirabilis jalapa. In: Memoria del Primer Congreso Nacional de Entomología y Fitopatología. Mexico: Escuela Nacional de Agricultura. p 491–500.
  • Shattock RC, Tooley PW, Sweigard J, Fry WE. 1987. Genetic studies of Phytophthora infestans. In: Day PR, Jellis GJ, eds. Genetics and plant pathogenesis. Oxford, England: Blackwell Scientific Publications. p 175–185.
  • Slatkin M. 1985. Rare alleles as indicators of gene flow. Evolution 39: 53–65.
  • Slatkin M., Barton NH. 1989. A comparison of three indirect methods for estimating average levels of gene flow. Evolution 43: 1349–1368.
  • Spielman LJ, Sweigard JA, Shattock RC, Fry WE. 1990. The genetics of Phytophthora infestans: segregation of allozyme markers in F2 and backcross progeny and the inheritance of virulence against potato resistance genes R2 and R4 in F1 progeny. Exp Mycol 14: 57–69.
  • Stamps DJ, Waterhouse GM, Newhook FJ, Hall GS. 1990. Revised tabular key to the species of Phytophthora. Mycol Pap No. 162. Kew, England. CAB International Mycological Institute. 28 p.
  • Stebbins GL. 1950. Variation and evolution in plants. New York, New York: Columbia University Press. 643 p.
  • Tooley PW, Carras MM, Falkenstein KF. 1996. Relationships among group IV Phytophthora species inferred by restriction analysis of the ITS2 region. J Phytopathol 144: 363–369.
  • Tooley PW, Carras MM, Falkenstein KF., Fry WE, Villarreal Gonzalez MJ. 1985. Isozyme characterization of sexual and asexual Phytophthora infestans populations. J Hered 76: 431–435.
  • Waterhouse GM. 1963. Key to the species of Phytophthora de Bary. Mycol Pap, No. 92. Kew, England, Commonwealth Mycological Institute. 22 p.
  • Williams JGK, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucl Acids Res 18: 6531–6535.
  • Wright S. 1951. The genetical structure of populations. Ann Eugen 15: 323–354.
  • Yap IV, Nelson RJ. 1996. WinBoot: a program for performing bootstrap analysis of binary data to determine the confidence limits of UPGMA-based dendrograms. IRRI Disc Pap Ser No. 14. Manila, Philippines: International Rice Research Institute. 22 p.

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