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Molecular Evolution and Systematics

Molecular phylogeny of the Nectria haematococca-Fusarium solani species complex

Pages 919-938 | Accepted 27 Mar 2000, Published online: 04 Jun 2019

LITERATURE CITED

  • Abney TS, Richards TL, Roy KW. 1993. Fusarium solani from ascospores of Nectria haematocooca causes sudden death syndrome of soybean. Mycologia 85: 801–806.
  • Achenbach LA, Patrick J, Gray L. 1996. Use of RAPD markers as a diagnostic tool for the identification of Fusarium solani isolates that cause soybean sudden death syndrome. Pl Dis 80: 1228–1232.
  • Bain LJ, Engelhardt M. 1992. Introduction to probability and mathematical statistics. Belmont, California: Duxbury Press. 644 p.
  • Berbee ML, Taylor JW. 1993. Dating the evolutionary radiations of the true fungi. Can J Bot 71: 1114–1127.
  • Booth C. 1971. The genus Fusarium. Kew, Surrey, UK: Commonwealth Mycological Institute. 237 p.
  • Bruns TD, Szaro TM, Gardes M, Cullings KW, Pan JJ, Taylor DL, Horton TR, Kretzer A, Garbelotto M, Li Y. 1998. A sequence database for the identification of ectomycorrhizal basidiomycetes by phylogenetic analysis. Mol Ecol 7: 257–272.
  • Burt A, Carter DA, Koenig GL, White TJ, Taylor JW. 1996. Molecular markers reveal cryptic sex in the human pathogenic fungus Coccidioides immitis. Proc Natl Acad Sci USA 93: 770–773.
  • Campbell TM, Collins WW. 1987. Fusarium solani root rot resistance in sweet potatoes. J Am Soc Hort Sci 112: 386–389.
  • Cannon PF, Hawksworth DL. 1984. A revision of the genus Neocosmospora (Hypocreales). Trans Br Mycol Soc 82: 673–688.
  • Cho S, Mirchell A, Regier JC, Mitter C, Poole RW, Friedender TP, Zhao S. 1995. A highly conserved nuclear gene for low-level phylogenetics: elongation factor-1α recovers morphological-based tree for heliothine moths. Mol Biol Evol 12: 650–656.
  • Clark CA. 1980. End rot, surface rot, and stem lesions caused on sweet potato by Fusarium solani. Phytopathology 70: 109–112.
  • Covert SF, Enkerli J, Miao VP, VanEtten HD. 1996. A gene for maackiain detoxification from a dispensible chromosome of Nectria haematococca. Mol Gen Genet 251: 397–406.
  • Crowhurst RN, Hawthorne BT, Rikkerink EHA, Templeton MD. 1991. Differentiation of Fusarium solani f. sp. Cucurbitae races 1 and 2 by random amplification of polymorphic DNA. Curr Genet 20: 391–396.
  • Crowhurst RN, Hawthorne BT, Rikkerink EHA, Templeton MD., Rees-Gorge J, Rikkerink EHA, Templeton MD. 1992. High efficiency transformation of Fusarium solani f. sp. cucurbitae race 2 (mating population V). Curr Genet 21: 463–469.
  • Cunningham CW. 1997. Can three incongruence tests predict when data should be combined? Mol Biol Evol 14: 733–740.
  • de Queiroz K, Gauthier J. 1994. Toward a phylogenetic system of biological nomenclature. TREE 9: 27–31.
  • Domsch K, Gams W, Anderson TH. 1980. Compendium of soil fungi. Vol. 1. New York: Academic Press. 859 p.
  • Doyle JJ, Lavin M, Bruneau A. 1992. Contributions of molecular data to Papilionoid legume systematics. In: Soltis PS, Soltis DE, Doyle JJ, eds. Molecular systematics of plants. New York: Chapman and Hall. p 223–251.
  • Edel V, Steinberg C, Gautheron N, Alabouvette C. 1996. Evaluation of restriction analysis of polymerase chain reaction (PCR)-amplified ribosomal DNA for the identification of Fusarium species. Mycol Res 101: 179–187.
  • Eriksson T. 1997. AutoDecay. Vers.3.0.3. Stockholm: Univ. Stockholm, Botaniska institutionen.
  • Friedlander TP, Horst KR, Regier JC, Mitter C, Peigler RS, Fang QQ. 1998. Two nuclear genes yield concordant relationships within Attacini (Lepidoptera: Saturniidae). Mol Phylogenet Evol 9: 131–140.
  • Gardes M, Bruns TD. 1993. ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts. Mol Ecol 2: 112–118.
  • Geiser DM, Frisvad JC, Taylor JW. 1998a. Evolutionary relationships in Aspergillus section Funigati inferred from partial ß-tubulin and hydrophobin DNA sequences. Mycologia 90: 831–845.
  • Geiser DM, Frisvad JC, Taylor JW., Pitt JI, Taylor JW. 1998b. Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus. Proc Natl Acad Sci USA 95: 388–393.
  • Geiser DM, Frisvad JC, Taylor JW., Pitt JI, Taylor JW., Timberlake WE, Arnold ML. 1996. Loss of meiosis in Aspergillus. Mol Biol Evol 13: 809–817.
  • Gerlach W, Nirenberg H. 1982. The genus Fusarium—a pictorial atlas. Mitt Biol Bundesanst Land Forstwirtsch Berlin-Dahlem 209: 1–406.
  • Glass NL, Smith ML. 1994. Structure and function of a mating type gene from the homothallic species Neurospora africana. Mol Gen Genet 244: 401–409.
  • Graham SW, Kohn JR, Morton BR, Eckenwalder JE, Barrett SCH. 1998. Phylogenetic congruence and discordance among one morphological and three molecular data sets from Pontederiaceae. Syst Biol 47: 545–567.
  • Gräser Y, Volovesk M, Arrington J, Schönian G, Presber W, Mitchell TG, Vilgalys R. 1996. Molecular markers reveal that population structure of the human pathogen Candida albicans exhibits both clonality and recombination. Proc Natl Acad Sci USA 93: 12473–12477.
  • Greuter W, Barrie FR, Burdet HM, Chaloner WG, Demoulin V, Hawksworth DL, Jørgensen PM, Nicolson DH, Silva PC, Trehane P, McNeill J. 1994. International code of botanical nomenclature (Tokyo Code). Königstein, Germany: Koeltz Scientific Books. 389 p.
  • Guadet J, Julien J, Lafay JF, Brygoo Y. 1989. Phylogeny of some Fusarium species, as determined by large-subunit rRNA comparisons. Mol Biol Evol 6: 227–242.
  • Hawthorne BT, Rees-George J, Boradhurst PG. 1992. Mating behaviour and pathogenicity of New Zealand isolates of Nectria haematococca (Fusarium solani). New Zealand J Crop Hort Sci 20: 51–57.
  • Hering O. 1997. Charakterisierung und Differenzierung bei Fusarium Link mittels RAPD und ITS-RFLP. Mitt Biol Bundesanst Land Forstwirtsch Berlin-Dahlem 331:1–133.
  • Hibbett DS, Donoghue MJ. 1998. Integrating phylogenetic analysis and classification in fungi. Mycologia 90:347–356.
  • Huelsenbeck JP, Bull JJ, Cunningham CW. 1996. Combining data in phylogenetic analysis. Trends Ecol Evol 11:152–158.
  • Kern H. 1978. Les naphthazarines des Fusarium. Ann Phytopathol 10: 327–345.
  • Kluge AG. 1988. Parsimony in vicariance biogeography: a quantitative method and a greater antillean example. Syst Zool 37: 315–328.
  • Kølmark HG. 1984. Mutants with continuous microcycle conidiation in the filamentous fungus Fusarium solani f. sp. pisi. Mol Gen Genet 198: 12–18.
  • Li D, Chung KR, Smith DA, Schardl CL. 1995. The Fusarium solani gene encoding kievitone hydratase, a secreted enzyme that catalyzes detoxification of a bean phytoalexin. Mol Pl-Microbe Interact 8: 388–397.
  • LoBuglio KF, Pitt JI, Taylor JW. 1993. Phylogenetic analysis of two ribosomal DNA regions indicates multiple independent losses of a sexual Talaromyces state among asexual Penicillium species in subgenus Biverticillium. Mycologia 85: 592–604.
  • Lyons-Weiler J, Hoelzer GA. 1997. Escaping from the Felsenstein zone by detecting long branches in phylogenetic data. Mol Phylogenet Evol 8: 375–384.
  • Lyons-Weiler J, Hoelzer GA., Tausch RJ. 1996. Relative apparent synapomorphy analysis (RASA) I: the statistical measurement of phylogenetic signal. Mol Biol Evol 13: 749–757.
  • Maddison WP, Maddison DR. 1992. MacClade: analysis of phylogeny and character evolution, Version 3. Sunderland, MA: Sinauer Associates. 398 p.
  • Mardiak J, Danisovicová A, Trupl J, Sloboda J, Jesenká Z, Krcmery V Jr. 1993. Three cases of fatal infection due to Fusarium solani in patients with cancer. Clin Infect Dis 17: 930–932.
  • Marek ET, Schardl CL, Smith DA. 1989. Molecular transformation of Fusarium solani with an antibiotic resistance marker having no fungal DNA homology. Curr Genet 15: 421–428.
  • Matuo T, Sakurai Y. 1965. Fusarium solani f. sp. robiniae n. f., one of the casual fusaria of the twig blight of Robinia psedoacacia. Ann Phytopathol Soc Japan 30: 562–656.
  • Matuo T, Sakurai Y., Snyder WC. 1973. Use of morphology and mating populations in the identification of formae speciales in Fusarium solani. Phytopathology 63: 562–565.
  • May GS, Tsang ML-S, Smith H, Fidel S, Morris NR. 1987. Aspergillus nidulans ß-tubulin genes are unusually divergent. Gene 55: 231–243.
  • Nelson PE, Toussoun TA, Marasas WFO. 1983. Fusarium species: an illustrated manual for identification. University Park, PA: Pennsylvania State University. 193 p.
  • Nirenberg HI. 1996. Morphological and phytopathological differentiation of Fusarium strains within the Martiella section. Sydowia 48: 197–198.
  • O'Donnell K. 1992. Ribosomal DNA internal transcribed spacers are highly divergent in the phytopathogenic ascomycete Fusarium sambucinum (Gibberella pulicaris). Curr Genet 22: 213–220.
  • O'Donnell K.. 1993. Fusarium and its near relatives. In: Reynolds DR, Taylor JW, eds. The fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematics. Wallingford, UK: CAB International. p 225–233.
  • O'Donnell K., Cigelnik E. 1997. Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Mol Phylogenet Evol 7: 103–116.
  • O'Donnell K., Cigelnik E., Nirenberg HI. 1998a. Molecular systematic and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90: 465–493.
  • O'Donnell K., Cigelnik E., Nirenberg HI., Gray LE. 1995. Phylogenetic relationships of the soybean sudden death syndrome pathogen Fusarium solani f. sp. phaseoli from rDNA sequence data and PCR primers for its identification. Mol Pl-Microbe Interact 5: 709–716.
  • O'Donnell K., Cigelnik E., Nirenberg HI., Gray LE., Kistler HC, Cigelnik E, Ploetz RC. 1998b. Multiple evolutionary origins of the fungus causing Panama disease of banana: concordant evidence from nuclear and mitochondrial gene genealogies. Proc Natl Acad Sci USA 95: 2044–2049.
  • O'Donnell K., Cigelnik E., Nirenberg HI., Gray LE., Kistler HC, Cigelnik E, Ploetz RC., Nirenberg HI, Aoki T, Cigelnik E. 2000. A multigene phylogeny of the Gibberella fujikuroi species complex: detection of additional phylogenetically distinct species. Mycoscience 41: 61–78.
  • Palm ME, Gams W, Nirenberg HI. 1995. Plectosporium, a new genus for Fusarium tabacinum, the anamorph of Plectosphaerella cucumerina. Mycologia 87: 397–406.
  • Pöggeler S, Risch S., Kück U, Osiewacz HD. 1997. Mating-type genes from the homothallic fungus Sordaria macrospora are functionally expressed in a heterothallic ascomycete. Genetics 147: 567–580.
  • Polishook JD, Bills GF, Rossman AY. 1991. A new species of Neocosmospora with a Penicillifer anamorph. Mycologia 83: 797–804.
  • Raeder V, Broda P. 1985. Rapid preparation of DNA from filamentous fungi. Lett Appl Microbiol 1: 17–20.
  • Randall TA, Metzenberg RL. 1995. Species-specific and mating type-specific DNA regions adjacent to mating type idiomorphs in the genus Neurospora. Genetics 141: 119–136.
  • Rehner SA, Samuels GJ. 1995. Molecular systematics of the Hypocreales: a teleomorph gene phylogeny and the status of their ananmorphs. Can J Bot 73: S816–S823.
  • Rogers LM, Flaishman MA, Kolattukudy PE. 1994. Cutinase gene disruption in Fusarium solani f. sp. pisi decreases its virulence on pea. Pl Cell 6: 935–945.
  • Rossman AY, Samuels GJ, Rogerson CT, Lowen R. 1999. Genera of Bionectriaceae, Hypocreaceae and Nectriaceae (Hypocreales, Ascomycetes). Stud Mycol 42: 1–248.
  • Sakurai Y, Matuo T. 1959. On the form name and race of Hypomyces solani (Rke. et Berth.) Snyd. et Hans, which is pathogenic to the mulberry trees. Ann Phytopathol Soc Japan 24: 219–223.
  • Sakurai Y, Matuo T.. 1960. Studies on the intraspecific groups in Fusarium solani (1). On mating populations and morphologic groups in the species. Res Rep Fac Textile Sericulture, Shinshu Univ 10: 21–32.
  • Sakurai Y, Matuo T.. 1961a. Taxonomy of the casual fungus of trunk-blight of Xanthoxylum piperitum and heterothallism in this fungus. Ann Phytopathol Soc Japan 26: 112–117.
  • Sakurai Y, Matuo T.. 1961b. Studies on the intraspecific groups in Fusarium solani (2). On the differentiation in utilization of carbon sources among the intraspecific groups. Ann Phytopathol Soc Japan 26: 118–124.
  • Samuels GJ, Rogerson CT. 1984. Nectria atrofusca and its anamorph, Fusarium staphyleae, a parasite of Staphylea trifolia in Eastern North America. Britonnia 36: 81–85.
  • Schardl CL, Leuchtmann A, Tsai HF, Collett MA, Watt DM, Scott DB. 1994. Origin of a fungal symbiont of perennial ryegrass by interspecific hybridization of a mutualist with the ryegrass choke pathogen, Epichloë typhi na. Genetics 136: 1307–1317.
  • Simpson BB, Ogorzaly MC. 1995. Economic botany: plants in our world. New York: McGraw-Hill. 742 p.
  • Smith EF. 1899. Wilt disease of cotton, watermelon, and cowpea (Neocosmospora nov. gen.). USDA Bull 17: 1–54.
  • Snyder WC, Hansen HN. 1941. The species concept in Fusarium with reference to section Martiella. Am J Bot 28: 738–742.
  • Spatafora JW, Blackwell M. 1994. The polyphyletic origins of ophiostomatoid fungi. Mycol Res 98: 1–9.
  • Summerell BA, Rugg CA, Burgess LW. 1993. Mycogeography of Fusarium, survey of Fusarium species associated with forest and woodland communities in north Queensland, Australia. Mycol Res 97: 1015–1019.
  • Swofford DL. 1998. PAUP*4.0: phylogenetic analysis using parsimony. Sunderland, MA: Sinauer Associates.
  • Taylor JW, Jacobson DJ, Fisher MC. 1999. The evolution of asexual fungi: reproduction, speciation and classification. Annu Rev Phytopathol 37: 197–246.
  • Templeton AR. 1983. Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of humans and the apes. Evolution 37: 221–244.
  • Toussoun TA, Snyder WC. 1961. The pathogenicity, distribution, and control of two races of Fusarium (Hypomyces) solani f. Cucurbitae. Phytopathology 51: 17–22.
  • Turgeon BG. 1998. Application of mating type gene technology to problems in fungal biology. Annu Rev Phytopathol 36: 115–137.
  • Ueda S, Udagawa S. 1983. A new Japanese species of Neocosmospora from marine sludges. Trans Mycol Soc Japan 16: 337–347.
  • VanEtten HD. 1978. Identification of additional habitats of Nectria haematococca mating population VI. Phytopathology 68: 1552–1556.
  • VanEtten HD., Kisder HC. 1988. Nectria haematococca mating populations I and VI. Adv Pl Pathol 6: 189–206.
  • VanEtten HD., Kisder HC., Matthews DE, Matthews PS. 1989. Phytoalexin detoxification: importance for pathogenecity and practical implications. Annu Rev Phytopathol 27: 143–164.
  • White TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to methods and applications. New York: Academic Press. p 315–322.
  • Wollenweber HW. 1943. Fusarium---Monographie II. Fungi parasitici et saprophytici. Zentralbl Bakteriol Parasitendkd Infektionskr II 106: 171–202.
  • Wollenweber HW., Reinking OA. 1935. Die Fusarien ihre Beschreibung, Schadwirkung und Bekämpfung. Berlin: Paul Parey. 355 p.
  • Wu Q, Sandrock TM, Turgeon BG, Yoder OC, Wirsel SG, Aist JR. 1998. A fungal kinesin required for organelle motility, hyphal growth, and morphogenesis. Mol Biol Cell 9: 89–101.
  • Xu J, Mitchell TG, Vilgalys R. 1999. PCR-restriction fragment length polymorphism (RFLP) analyses reveal both extensive clonality and local genetic differences in Canada albicans. Mol Ecol 8: 59–73.
  • Yun SH, Berbee ML, Yoder OC, Turgeon BG. 1999. Evolution of the fungal self-fertile reproductive life style from self-sterile ancestors. Proc Natl Acad Sci USA 96: 5592–5597.

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