396
Views
15
CrossRef citations to date
0
Altmetric
Systematics

Cadophora meredithiae and C. interclivum, new species from roots of sedge and spruce in a western Canada subalpine forest

ORCID Icon, ORCID Icon, , , , & ORCID Icon show all
Pages 201-214 | Received 07 Jun 2017, Accepted 15 Nov 2017, Published online: 04 Jun 2018

LITERATURE CITED

  • Arenz BE, Blanchette RA. 2009. Investigations of fungal diversity in wooden structures and soils at historic sites on the Antarctic Peninsula. Canadian Journal of Microbiology 55:46–56.
  • Blanchette RA, Held BW, Arenz BE, Jurgens JA, Baltes NJ, Duncan SM, Farrell RL. 2010. An Antarctic hot spot for fungi at Shackleton’s historic hut on Cape Royds. Microbial Ecology 60:29–38.
  • Blanchette RA, Held BW, Jurgens JA, McNew DL, Harrington TC, Duncan SM, Farrell RL. 2004. Wood-destroying soft rot fungi in the historic expedition huts of Antarctica. Applied and Environmental Microbiology 70:1328–1335.
  • Carbone I, Kohn L. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91:553–556.
  • Conant NF. 1937. The occurance of a human pathogenic fungus as a saprophyte in nature. Mycologia 29:597–598.
  • Crous PW, Shivas RG, Wingfield MJ, Summerell BA, Rossman AY, Alves JL, Adams GC, Barreto RW, Bell A, Coutinho ML, Flory SL, Gates, Grice KR, Hardy GEStJ, Kleczewski NM, Lombard L, Longa CMO, Louis-Seize G, Macedo F, Mahoney DP, Maresi G, Martin-Sanchez PM, Marvanova L, Minnis AM, Morgado LN, Noordeloos ME, Phillips AJL, Quaedvlieg W, Ryan PG, Saiz-Jimenez C, Seifert KA, Swart WJ, Tan YP, Tanney JB, Thu PQ, Videira SIR, Walker DM, Groenewald JZ. 2012. Fungal Planet description sheets: 128–153. Persoonia 29:146–201.
  • Day MJ, Currah RS. 2011. Role of selected dark septate endophyte species and other hyphomycetes as saprobes on moss gametophytes. Botany 89:349–359.
  • Day NJ, Dunfield KE, Antunes PM. 2016. Fungi from a non-native invasive plant increase its growth but have different growth effects on native plants. Biological Invasions 18:231–243.
  • Glynou K, Ali T, Buch, AK, Haghi Kia S, Ploch S, Xia X, Çelik A, Thines M, Maciá-Vicente JG. 2016. The local environment determines the assembly of root endophytic fungi at a continental scale. Environmental Microbiology 18:2418–2434.
  • Gramaje D, Mostert L, Armengol J. 2011. Characterization of Cadophora luteo-olivacea and C. melinii isolates obtained from grapevines and environmental samples from grapevine nurseries in Spain. Phytopathologia Mediterranea 50:S112–S126.
  • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32:1792–1797.
  • Gams W. 2000. Phialophora and some similar morphologically little-differetiated anamorphs of divergent ascomycetes. Studies in Mycology 45:187–199.
  • Geiser DM, Jimenez-Gasco MD, Kang SC, Makalowska I, Veeraraghavan N, Ward TJ, Zhang N, Kuldau GA, O’Donnell K. 2004. FUSARIUM-ID v. 1.0: a DNA sequence database for identifying Fusarium. European Journal of Plant Pathology 110:473–479.
  • Grünig CR, Duò A, Sieber TN, Holdenrieder O. 2008a. Assignment of species rank to six reproductively isolated cryptic species of the Phialocephala fortinii s.l.–Acephala applanata species complex. Mycologia 100:47–67.
  • Grünig CR, Queloz V, Sieber TN, Holdenrieder O. 2008b. Dark septate endophytes (DSE) of the Phialocephala fortinii s.l.–Acephala applanata species complex in tree roots: classification, population biology, and ecology. Botany 86:1355–1369.
  • Gupta P, Samant K, Sahu A. 2012. Isolation of cellulose-degrading bacteria and determination of their cellulolytic potential. International Journal of Microbiology 2012:578925, doi:10.1155/2012/578925
  • Harrington TC, McNew DL. 2003. Phylogenetic analysis places the Phialophora-like anamorph genus Cadophora in the Helotiales. Mycotaxon 87:141–151.
  • Herrera H, Valadares R, Contreras D, Bashan Y, Arriagada C. 2017. Mycorrhizal compatibility and symbiotic seed germination of orchids from the Coastal Range and Andes in south central Chile. Mycorrhiza 27:175–188.
  • Ingold CT. 1942. Aquatic hyphomycetes of decaying alder leaves. Transactions of the British Mycological Society 25:339–417.
  • Jumpponen A, Trappe J. 1998. Dark septate endophytes: a review of facultative biotrophic root-colonizing fungi. New Phytologist 140:295–310.
  • Kegel W. 1906. Varicosporium elodeae, ein Wasserpilz mit auffallender Konidienbildung. Berichte der Deutschen Botanischen Gesellschaft 24:213–216.
  • Knapp DG, Pintye A, Kovacs GM. 2012. The dark side is not fastidious—dark septate endophytic fungi of native and invasive plants of semiarid sandy areas. PLoS ONE 7:e32570.
  • Lagerberg T, Lundberg G, Melin E. 1927. Biological and practical researches into blueing in pine and spruce. Svenska Skogsvdrdsforen Tidskr 25 (263):145–272, 561–739.
  • Luchi N, Capretti P, Bonello P. 2007. Production of Diplodia scrobiculata and Diplodia pinea pycnidia on ground Austrian pine needle agar medium. Phytopathologia Mediterranea 46:230–235.
  • Luo J, Walsh E, Blystone D, Zhang N. 2015. Five new Pseudophialophora species from grass roots in the oligotrophic pine barrens ecosystem. Fungal Biology 119:1205–1215.
  • Luo J, Walsh E, Naik A, Zhuang W, Zhang K, Cai L, Zhang N. 2014a. Temperate pine barrens and tropical rain forests are both rich in undescribed fungi. PLoS ONE 9:e103753.
  • Luo J, Walsh E, Zhang N. 2014b. Four new species in Magnaporthaceae from grass roots in New Jersey pine barrens. Mycologia 106: 580–588.
  • MarvanovaL, Pascoal C, Cassio F. 2003. New and rare hyphomycetes from streams of northweast Portugal. Part I. Cryptogamie, Mycologie 24:339–358.
  • Matheny PB, Liu YJ, Ammirati JF, Hall BD. 2002. Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales). American Journal of Botany 89:688–698.
  • Medlar EM. 1915. A new fungus, Phialophora verrucosa, pathogenic for man. Mycologia 7:200–203.
  • Navarrete F, Abreo E, Martínez Sn, Bettucci L, Lupo S. 2011. Pathogenicity and molecular detection of Uruguayan isolates of Greeneria uvicola and Cadophora luteo-olivacea associated with grapevine trunk diseases. Phytopathologia Mediterranea 50:S166–S175.
  • Pikovskaya R. 1948. Mobilization of phosphorus and soil in connection with the vital activity of some microbial species. Mikrobiologii 17:362–370.
  • Rehner SA, Samuels GJ. 1995. Molecular systematics of the Hypocreales: a teleomorph gene phylogeny and the status of their anamorphs. Canadian Journal of Botany 73:816–823.
  • Rice A, Currah R. 2005. Oidiodendron: a survey of the named species and related anamorphs of Myxotrichum. Studies in Mycology 53:83–120.
  • Ridgway R. 1912. Color standards and color nomenclature. Washington DC: Published by the author.
  • Schiebold JMI, Bidartondo MI, Karasch P, Gravendeel B, Gebauer G. 2017. You are what you get from your fungi: nitrogen stable isotope patterns in Epipactis species. Annals of Botany 119:1085–1095.
  • Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA, Chen W, Bolchacova E, Voigt K, Crous PW, DNA barcode consortium. 2012. Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. Proceedings of the National Academy of Sciences of the United States of America 109:6241–6246, doi:10.1073/pnas.1117018109
  • Selosse MA, Faccio A, Scappaticci G, Bonfante P. 2004. Chlorophyllous and achlorophyllous specimens of Epipactis microphylla (Neottieae, Orchidaceae) are associated with ectomycorrhizal septomycetes, including truffles. Microbial Ecology 47:416–426.
  • Stiller JW, Hall BD. 1997. The origin of red algae: implications for plastid evolution. Proceedings of the National Academy of Sciences of the United States of America 94:4520–4525.
  • Swofford DL. 2002. PAUP*: Phylogenetic Analysis Using Parsimony (*and other methods). Sunderland, Massachusetts: Sinauer Associates.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution 30:2725–2729.
  • Taylor DL, Hollingsworth T N, McFarland JW, Lennon NJ, Nusbaum C, Ruess RW. 2014. A first comprehensive census of fungi in soil reveals both hyperdiversity and fine-scale niche partitioning. Ecological Monographs 84:3–20.
  • Travadon R, Lawrence DP, Rooney-Latham S, Gubler WD, Wilcox WF, Rolshausen PE, Baumgartner K. 2015. Cadophora species associated with wood-decay of grapevine in North America. Fungal Biology 119: 53–66.
  • WalshE, Luo J, Naik A, Preteroti T, Zhang N. 2015. Barrenia, a new genus associated with roots of switchgrass and pine in the oligotrophic pine barrens. Fungal Biology 119:1216–1225.
  • Walsh E, Luo J, Zhang N. 2014. Acidomelania panicicola gen. et sp. nov. from switchgrass roots in acidic New Jersey pine barrens. Mycologia 106:856–864.
  • Wang Z, Binder M, Schoch CL, Johnston PR, Spatafora JW, Hibbett DS. 2006a. Evolution of helotialean fungi (Leotiomycetes, Pezizomycotina): a nuclear rDNA phylogeny. Molecular Phylogenetics and Evolution 41:295–312.
  • Wang Z, Johnston PR, Takamatsu S, Spatafora JW, Hibbett DS. 2006b. Toward a phylogenetic classification of the Leotiomycetes based on rDNA data. Mycologia 98:1065–1075.
  • White TJ, Bruns T, Lee S, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to the methods and applications. New York: Academic Press. p. 315–322.
  • Wiemken V, Laczko E, Ineichen K, Boller T. 2001. Effects of elevated carbon dioxide and nitrogen fertilization on mycorrhizal fine roots and the soil microbial community in beech-spruce ecosystems on siliceous and calcareous soil. Microbial Ecology 42:126–135.
  • Yu T, Nassuth A, Peterson RL. 2001. Characterization of the interaction between the dark septate fungus Phialocephala fortinii and Asparagus officinalis roots. Canadian Journal of Microbiology 47:741–753.
  • Zijlstra J, VantHof P, Baar J, Verkley G, Summerbell R, Paradi I, Braakhekke W, Berendse F. 2005. Diversity of symbiotic root endophytes of the Helotiales in ericaceous plants and the grass, Dechampsia flexuosa. Studies in Mycology 53:147–162.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.