Phytophthora acaciae sp. nov., a new species causing gummosis of black wattle in Brazil

LITERATURE CITED

• Abad ZG, Abad JA, Coffey MD, Oudemans PV, Man in ‘t Veld WA, de Gruyter H, Cunnington J, Louws FJ. 2008. Phytophthora bisheria sp. nov.: a new species identified in isolates from the rosaceous raspberry, rose and strawberry in three continents. Mycologia 100:99–110.
   Google Scholar
• Abad ZG, Ivors KL, Gallup CA, Abad JA, Shew HD. 2011. Morphological and molecular characterization of Phytophthora glovera sp. nov. from tobacco in Brazil. Mycologia 103:341–350.
   PubMed Web of Science ®Google Scholar
• Alves TCA, Tessmann DJ, Ivors KL, Ristaino JB, Santos AF. 2016. First report of gummosis caused by Phytophthora frigida on Black Wattle in Brazil. Plant Disease 100:2336.
   Google Scholar
• Blair JE, Coffey MD, Park SY, Geiser DM, Kang SA. 2008. Multilocus phylogeny for Phytophthora utilizing markers derived from complete genome sequences. Fungal Genetics and Biology 45:266–277.
   PubMed Web of Science ®Google Scholar
• Chan JM, Day P, Feely J, Thompson R, Little KM, Norris CH. 2015. Acacia mearnsii industry overview: current status, key research and development issues. Southern Forests 77:19–30.
   Web of Science ®Google Scholar
• Cooke DEL, Drenth A, Duncan JM, Wagelsg G, Brasier CM. 2000. Molecular phylogeny of Phytophthora and related Oomycetes. Fungal Genetics and Biology 30:17–32.
   PubMed Web of Science ®Google Scholar
• Doyle JJ, Doyle JL. 1991. Isolation of plant DNA from fresh tissue. Focus 1:13–15.
   Google Scholar
• Erwin DC, Ribeiro OK. 1996. Phytophthora diseases worldwide. St Paul, Minnesota: American Phytopathological Society. 562 p.
   Google Scholar
• Gómez-Alpizar L, Carbone I, Ristaino JB. 2007. An Andean origin of Phytophthora infestans inferred from mitochondrial and nuclear gene genealogies. Proceedings of the National Academy of Sciences of the United States of America 104: 3306–3311.Gómez-AlpizarL, Hu C, Olivia R, Forbes G, Ristaino JB. 2008. Phylogenetic relationships of a new species, Phytophthora andina, from the highlands of Ecuador that is closely related to the Irish Potato famine pathogen Phytophthora infestans. Mycologia 100:590–602.
   Google Scholar
• Goodwin SB. 1997. The population genetics of Phytophthora. Phytopathology 87:462–473.
   PubMed Web of Science ®Google Scholar
• Hall T. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41:95–98.
   Google Scholar
• Islam S, Babadoost M, Lambert KN, Ndeme A. 2005. Characterization of Phytophthora capsici isolates from processing pumpkin in Illinois. Plant Disease 89:191–197.
   PubMed Web of Science ®Google Scholar
• Kroon LP, Bakker FT, van Den Bosch GB, Bonants PJ, Flier WG. 2004. Phylogenetic analysis of Phytophthora species based on mitochondrial and nuclear DNA sequences. Fungal Genetics and Biology 41:766–782.
   PubMed Web of Science ®Google Scholar
• Martin FN. 2000. Phylogenetic relationships of some Pythium species inferred from sequence analysis of the mitochondrially encoded cytochrome oxidase II gene. Mycologia 92:711–727.
   Web of Science ®Google Scholar
• Martin FN, Blair JE, Coffey MD. 2014. A combined mitochondrial and nuclear multilocus phylogeny of the genus Phytophthora. Fungal Genetics and Biology 66:19–32.
   PubMed Web of Science ®Google Scholar
• Martin FN, Tooley PW. 2003. Phylogenetic relationships among Phytophthora species inferred from sequence analysis of mitochondrially encoded cytochrome oxidase I and II genes. Mycologia 95:269–284.
   PubMed Web of Science ®Google Scholar
• Martin FN, Tooley PW, Blomquist C. 2004. Molecular detection of Phytophthora ramorum, the causal agent of sudden oak death in California and two additional species commonly recovered from diseased plant material. Phytopathology 94: 621–631.MasekoB, Burgtis TI, Coutinho TA, Wingfield MJ. 2007. Two new Phytophthora species front South African Eucalyptus plantations. Mycological Research 111:1321–133.
   Google Scholar
• Mchau GR, Coffey MD. 1994. An integrated study of morphological and isozyme patterns found within a worldwide collection of Phytophthora citrophthora and a redescription of the species. Mycological Research 98:1291–1299.
   Web of Science ®Google Scholar
• Nelson S, Abad ZG. 2010. Phytophthora morindae, a new species causing black flag on Noni (Morinda citrifolia L) in Hawaii. Mycologia 102:122–134.
   PubMed Web of Science ®Google Scholar
• Newhook FJ, Waterhouse GM, Stamps DJ. 1978. Tabular key to species of Phytophthora de Bary. Mycological Papers 143:1–20.
   Google Scholar
• Oliva RF, Kroon L, Chacón G, Flier WG, Ristaino JB, Forbes GA. 2010. Phytophthora andina sp. nov., a newly identified heterothallic pathogen of solanaceous hosts in the Andean highlands. Plant Pathology 59:613–625.
   Google Scholar
• Ristaino JB. 2012. A Lucid Key to the common species of Phytophthora. Plant Disease 96:897–903.
   PubMed Web of Science ®Google Scholar
• Robideau GP, de Cock AW, Coffey MD, Voglmayr H, Brouwer H, Bala K, Chitti DW, Niers ND, Eggertson QA, Gachon CMM, Hu CH, Küpper FC, Rintoul TL, Sarhan E, Verstappen ECP, Zhang Y, Bonants PJM, Ristaino JB, Léveske CA. 2011. DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer. Molecular Ecology Resources 11:1002–1011.
   PubMed Web of Science ®Google Scholar
• Roux J, Wingfield MJ. 1997. Survey and virulence of fungi occurring on diseased Acacia mearnsii in South Africa. Forest Ecology and Management 99:327–336.
   Web of Science ®Google Scholar
• Santos AF dos. 2016a. Phytophthora boehmeriae. Forest Phytophthoras 6 (1). [cited 2019 Jan 09]. Available from: http://journals.oregondigital.org/index.php/ForestPhytophthora/article/view/3884/3725
   Google Scholar
• Santos AF dos. 2016b. Phytophthora frigida. Forest Phytophthoras 6 (1). [cited 2019 Jan 09]. Available from: http://journals.oregondigital.org/index.php/ForestPhytophthora/article/view/3887/3710
   Google Scholar
• Santos AF dos, Auer CG, Grigoletti A. 1998. Caracterização de tipos de sintomas da gomose as Acácia-negra (Acacia mearnsii) no Sul do Brasil. Boletim de Pesquisa Florestal 37:31–40.
   Google Scholar
• Santos AF dos, Luz EDMN, Reis A. 2014. Phytophthora spp.: distribuição e associação com espécies florestais. Acesso livre à informação da Embrapa. [cited 2018 Oct 10]. Available from: http://www.alice.cnptia.embrapa.br/alice/handle/doc/993792
   Google Scholar
• Santos AF dos, Luz EDMN, Souza JT. 2005. Phytophthora nicotianae: agente etiológico da gomose da acácia-negra no Brasil. Fitopatologia Brasileira 30:81–84.
   Google Scholar
• Santos AF dos, Luz EDMN, Souza JT. 2006. First report of Phytophthora boehmeriae on black wattle in Brazil. Plant Pathology 55:813.
   Google Scholar
• Schena L, Duncan JM, Cooke DEL. 2007. Development and application of a PCR-based ‘molecular tool box’ for the identification of Phytophthora species damaging forests and natural ecosystems. Plant Pathology 57:64–75.
   Web of Science ®Google Scholar
• Stamps DJ, Waterhouse GM, Newhook FJ, Hall GS. 1990. Revised tabular key to the species of Phytophthora. Mycological Papers 162:1–28.
   Google Scholar
• Taylor JW, Jacobson DJ, Kroken S, Kasuga T, Geiser DM, Hibett DS, Fisher MC. 2000. Phylogenetic species recognition and species concepts in fungi. Fungal Genetics and Biology 31:21–32.
   PubMed Web of Science ®Google Scholar
• Thompson JD, Higgins DG, Gibson TJ. 1994. Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22:4673–4680.
   PubMed Web of Science ®Google Scholar
• Waterhouse GM. 1963. Key to the species of Phytophthora de Bary. Mycological Papers 92:1–22.
   Google Scholar
• Waterhouse GM. 1970. The genus Phytophthora de Bary. Mycological Papers 122:1–59.
   Google Scholar
• White TJ, Bruns T, Lee SB, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to methods and applications. San Diego, California: Academic Press. p. 315–322.
   Google Scholar
• Zeijemaker FCJ. 1971. Black-butt diseases of black wattle caused by Phytophthora nicotianae var. parasitica. Phytopathology 61:144–145.
   Google Scholar