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Ecology

The genetic relationships within Apiognomonia errabunda and related species

ORCID Icon, ORCID Icon, ORCID Icon & ORCID Icon
Pages 541-550 | Received 07 Jun 2018, Accepted 10 Jun 2019, Published online: 18 Jul 2019

LITERATURE CITED

  • Bahnweg G, Heller W, Stich S, Knappe C, Betz G, Heerdt C, Kehr RD, Ernst D, Langebartels C, Nunn AJ, Rothenburger J, Schubert R, Wallis P, Müller-Starck G, Werner H, Matyssek R, Sandermann H. 2005. Beech leaf colonization by the endophyte Apiognomonia errabunda dramatically depends on light exposure and climatic conditions. Plant Biology 7:659–669.
  • Berry FH. 1985. Anthracnose diseases of eastern hardwoods. Forest Insect & Disease Leaflet 133. Washington, DC: US Department of Agriculture Forest Service. 7 p.
  • Borchsenius F. 2009. FastGap 1.2. Department of Biosciences, Aarhus University, Aarhus, Denmark. [cited 2017 Nov 30]. Available from: http://www.aubot.dk/FastGap_home.htm
  • Butin H. 1981. Über den Rindenbranderreger Fusicoccum quercus Oudem. und andere Rindenpilze der Eiche. European Journal of Forest Pathology 11:33–44.
  • Carbone I, Kohn LM. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91:553–556.
  • Danti R, Sieber TN, Sanguineti G. 2002. Endophytic mycobiota in bark of European beech (Fagus sylvatica) in the Apennines. Mycological Research 106:1343–1348.
  • Darriba D, Taboada GL, Doallo R, Posada D. 2012. jModelTest 2: more models, new heuristics and high-performance computing. Nature Methods 9:772.
  • Eriksson OE. 2014. Checklist of the non-lichenized ascomycetes of Sweden. Acta Universitatis Upsaliensis: Symbolae Botanicae Upsalienses 36:1–501.
  • Excoffier L, Laval G, Schneider S. 2005. Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1:47–50.
  • Farr DF, Rossman AY. 2016. Fungal databases. Systematic Mycology and Microbiology Laboratory, Agricultural Research Service, US Department of Agriculture. [cited 2016 Sep 22]. Available from: https://nt.ars-grin.gov/fungaldatabases/
  • Gawel N, Jarret RL. 1991. Cytoplasmic genetic diversity in bananas and plantains. Euphytica 52:9–23.
  • Haemmerli UA, Brändle UE, Petrini O, McDermott JM. 1992. Differentiation of isolates of Discula umbrinella (Teleomorph: Apiognomonia errabunda) from beech, chestnut, and oak using randomly amplified polymorphic DNA markers. Molecular Plant-Microbe Interactions 5:479–483.
  • Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754–755.
  • Kowalski T. 1996. Grzyby endofityczne. III. Możliwości ograniczania populacji Mikiola fagi (Hartig) przez Apiognomonia errabunda (Rob. ex Desm.) Höhn. In: Mańka M., ed. Choroby Roślin a Środowisko. Poznań, Poland: Polskie Towarzystwo Fitopatologiczne. p. 83–98.
  • Kowalski T. 2003. Endophytic fungi: V. Mycobiota in living leaves of Acer pseudoplatanus and in necrotic tissues around galls of Drisina glutinosa. Phytopathologia Polonica 29:23–35.
  • Myren DT, Davis CN. 1991. Index of hosts and associated fungi identified by the forest insect and disease survey in Ontario from 1967 to 1987. III. Maples, birches and poplars. Sault Ste. Marie, Ontario, Canada: Forestry Canada, Ontario Region, Great Lakes Forestry Centre. 106 p.
  • O’Donnell K, Kistler HC, Tacke BK, Casper HH. 2000. Gene genealogies reveal global phylogeographic structure and reproductive isolation among lineages of Fusarium graminearum, the fungus causing wheat scab. Proceedings of the National Academy of Sciences of the United States of America 97:7905–7910.
  • Pehl L, Butin H. 1994. Endophytische Pilze in Blättern von Laubbäumen und ihre Beziehungen zu Blattgallen (Zoocecidien). Berlin-Dahlem, Germany: Mitteilungen aus der Biologischen Bundesanstalt für Land- und Forstwirtschaft. 56 p.
  • Schardl CL, Craven KD. 2003. Interspecific hybridization in plant-associated fungi and oomycetes: a review. Molecular Ecology 12:2861–2873.
  • Scholtysik A, Unterseher M, Otto P, Wirth C. 2013. Spatio-temporal dynamics of endophyte diversity in the canopy of European ash (Fraxinus excelsior). Mycological Progress 12:291–304.
  • Sieber VT, Hugentobler C. 1987. Endophytische Pilze in Blättern und Ästen gesunder und geschädigter Buchen (Fagus sylvatica L.). European Journal of Forest Pathology 17:411–425.
  • Sogonov MV, Castlebury LA, Rossman AY, Mejía LC, White JF. 2008. Leaf-inhabiting genera of the Gnomoniaceae, Diaporthales. Studies in Mycology 62:1–77.
  • Sogonov MV, Castlebury LA, Rossman AY, White JF. 2007. The type species of Apiognomonia, A. veneta, with its Discula anamorph is distinct from A. errabunda. Mycological Research 111:693–709.
  • Stoykov D, Assyov B. 2006. New data on Diaporthales from southwest Bulgaria. Trakia Journal of Sciences 4:1–6.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution 30:2725–2729.
  • Taylor JW, Jacobson DJ, Kroken S, Kasuga T, Geiser DM, Hibbett DS, Fisher MC. 2000. Phylogenetic species recognition and species concepts in fungi. Fungal Genetics and Biology 31:21–32.
  • Thompson JDD, Higgins DGG, Gibson TJJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22:4673–4680.
  • Toti L, Chapela IH, Petrini O. 1992a. Morphometric evidence for host-specific strain formation in Discula umbrinella. Mycological Research 96:420–424.
  • Toti L, Viret O, Chapela IH, Petrini O. 1992b. Differential attachment by conidia of the endophyte, Discula umbrinella (Berk. & Br.) Morelet, to host and non‐host surfaces. New Phytologist 121:469–475.
  • Toti L, Viret O, Horat G, Petrini O. 1993. Detection of the endophyte Discula umbrinella in buds and twigs of Fagus sylvatica. European Journal of Forest Pathology 23:147–152.
  • Vainio EJ, Velmala SM, Salo P, Huhtinen S, Müller MM. 2017. Defoliation of Tilia cordata trees associated with Apiognomonia errabunda infection in Finland. Silva Fennica 51:7749.
  • von Höhnel F. 1921. Bemerkungen zu H. Klebahn, Haupt- und Nebenfruchtformen der Ascomyceten 1918. Hedwigia 62:38–55.
  • Vu D, Groenewald M, Vries M de, Gehrmann T, Stielow B, Eberhardt U, Al-Hatmi A, Groenewald JZ, Cardinali G, Houbraken J, Boekhout T, Crous PW, Robert V, Verkley GJM. 2019. Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation. Studies in Mycology 92:135–154.
  • White TJ, Bruns T, Lee S, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to the methods and applications. New York: Academic Press. p. 315–322.

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