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Systematics

Additional new species suggest high dictyostelid diversity on Madagascar

ORCID Icon, ORCID Icon, , ORCID Icon, &
Pages 1026-1042 | Received 10 Feb 2020, Accepted 25 Jul 2020, Published online: 02 Oct 2020

LITERATURE CITED

  • Adl SM, Bass D, Lane CE, Lukeš J, Schoch CL, Smirnov A, Agatha S, Berney C, Brown MW, Burki F, Cárdenas P, Čepička I, Chistyakova L, del Campo J, Dunthorn M, Edvardsen B, Eglit Y, Guillou L, Hampl V, Heiss AA, Hoppenrath M, James TY, Karnkowska A, Karpov S, Kim E, Kolisko M, Kudryavtsev A, Lahr DJG, Lara E, Le Gall L, Lynn DH, Mann DG, Massana R, Mitchell EAD, Morrow C, Park JS, Pawlowski JW, Powell MJ, Richter DJ, Rueckert S, Shadwick L, Shimano S, Spiegel FW, Torruella G, Youssef N, Zlatogursky V, Zhang Q. 2019. Revisions to the classification, nomenclature, and diversity of eukaryotes. Journal of Eukaryotic Microbiology 66:4–119.
  • Adl SM, Simpson AGB, Lane CE, Lukeš J, Bass D, Bowser S S, Brown MW, Burki F, Dunthorn M, Hampl V, Heiss A, Hoppenrath M, Lara E, le Gall L, Lynn DH, McManus H, Mitchell EAD, Mozley-Stanridge SE, Parfrey LW, Pawlowski J, Rueckert S, Shadwick L, Schoch CL, Smirnov A, Spiegel FW. 2012. The revised classification of eukaryotes. Journal of Eukaryotic Microbiology 59:429–514.
  • Basu S, Fey P, Pandit Y, Dodson R, Kibbe WA, Chisholm RL. 2012. dictyBase 2013: integrating multiple Dictyostelid species. Nucleic Acids Research 41:D676–D683.
  • Cavender J, Landolt JC, Suthers HB, Stephenson SL. 2012. Dictyostelid cellular slime molds of Mexico. Mycosphere 3:336–351.
  • Cavender JC. 1978. Cellular slime molds in tundra and forest soils of Alaska including a new species, Dictyostelium septentrionalis. Canadian Journal of Botany 56:1326–1332.
  • Cavender JC, Landolt JC, Romeralo M, Perrigo A, Vadell EM, Stephenson SL. 2016. New species of Polysphondylium from Madagascar. Mycologia 108:80–109.
  • Cavender JC, Stephenson SL, Landolt JC, Vadell EM. 2002. Dictyostelid cellular slime moulds in the forests of New Zealand. New Zealand Journal of Botany 40:235–264.
  • Cavender JC, Vadell EM, Landolt JC, Winsett KE, Stephenson SL, Rollins AW, Romeralo M. 2013. New small dictyostelids from seasonal rainforests of Central America. Mycologia 105:610–635.
  • Fiore-Donno AM, Nikolaev SI, Nelson M, Pawlowski J, Cavalier-Smith T, Baldauf SL. 2010. Deep phylogeny and evolution of slime moulds (Mycetozoa). Protist 161:55–70.
  • Foissner W. 2009. Protist diversity and distribution: some basic considerations. In: Foissner W, Hawksworth DL. eds. Protist diversity and geographical distribution. Dordrecht, The Netherlands: Springer. p. 1–8.
  • Goodman SM, Benstead JP. 2005. Updated estimates of biotic diversity and endemism for Madagascar. Oryx 39:73–77.
  • Hagiwara H. 1973. Enumeration of the Dictyosteliaceae. Mycological reports from New Guinea and the Solomon Islands. Bulletin of the National Science Museum Tokyo 16:493–497.
  • Huss MJ. 1989. Dispersal of cellular slime molds by two soil invertebrates. Mycologia 81:677–682.
  • Kalla SE, Queller DC, Lasagni A, Strassmann JE. 2011. Kin discrimination and possible cryptic species in the social amoeba Polysphondylium violaceum. BMC Evolutionary Biology 11:31.
  • Landolt JC, Cavender JC, Stephenson SL, Vadell EM. 2008. New species of dictyostelid cellular slime moulds from Australia. Australian Systematic Botany 21:50–66.
  • Larsson A. 2014. AliView: a fast and lightweight alignment viewer and editor for large datasets. Bioinformatics 30:3276–3278.
  • Liu P, Li Y. 2010. Dictyostelids from Ukraine 1: two new records of Dictyostelium. Mycotaxon 111:275–278.
  • Liu P, Zou Y, Li W, Li Y, Li X, Che S, Stephenson SL. 2019. Dictyostelid cellular slime molds from Christmas Island, Indian Ocean. mSphere 4:e00133–19.
  • Medlin L, Elwood HJ, Stickel S, Sogin ML. 1988. The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene 71:491–499.
  • Miller MA, Pfeiffer W, Schwartz T. 2010. Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In: Proceedings of the Gateway Computing Environments Workshop (GCE), New Orleans, LA, 14 Nov. 2010. pp 1–8.
  • Mora C, Tittensor DP, Adl S, Simpson AGB, Worm B. 2011. How many species are there on earth and in the ocean? PLoS Biology, 9:e1001127.
  • Myers N, Mittermeier RA, Mittermeier CG, da Fonseca GAB, Kent J. 2000. Biodiversity hotspots for conservation priorities. Nature 403:853–858.
  • O’Dell W. 1979. Isolation, enumeration and identification of amebae from a Nebraska lake. Journal of Protozoology 26:265–269.
  • Perrigo AL. 2013. Diversity underfoot: systematics and biogeography of the dictyostelid social amoebae [PhD dissertation]. Uppsala, Sweden: Uppsala University. 56 p.
  • Perrigo AL, Baldauf SL, Romeralo M. 2013. Diversity of dictyostelid social amoebae in high latitude habitats of Northern Sweden. Fungal Diversity 58:185–198.
  • Perrigo AL, Romeralo M, Baldauf SL. 2012. What’s on your boots: an investigation into the role we play in protist dispersal. Journal of Biogeography 39:998–1003.
  • Raper KB. 1984. The dictyostelids. Princeton, New Jersey: Princeton University Press. p. 453.
  • Romeralo M, Cavender JC, Landolt JC, Stephenson SL, Baldauf SL. 2011. An expanded phylogeny of social amoebas (Dictyostelia) shows increasing diversity and new morphological patterns. BMC Evolutionary Biology 11:84.
  • Romeralo M, Escalante R, Baldauf SL 2012. Evolution and diversity of dictyostelid social amoebae. Protist 163:327–343.
  • Romeralo M, Fiz-Palacios O, Lado C, Cavender JC. 2007. A new concept for Dictyostelium sphaerocephalum based on morphology and phylogenetic analysis of nuclear ribosomal internal transcribed spacer region sequences. Canadian Journal of Botany 85:104–110.
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61:539–542.
  • Schaap P, Winckler T, Nelson M, Alvarez-Curto E, Elgie B, Hagiwara H, Cavender J, Milano-Curto A, Rozen DE, Dingermann T, Mutzel R, Baldauf SL. 2006. Molecular phylogeny and evolution of morphology in the social amoebas. Science 314:661–663.
  • Schilde C, Lawal HM, Kin K, Shibano-Hayakawa I, Inouye K, Schaap P. 2019. A well supported multi gene phylogeny of 52 Dictyostelia. Molecular Phylogenetics and Evolution 134:66–73.
  • Sheikh S, Thulin M, Cavender JC, Escalante R, Kawakami S, Lado C, Landolt JC, Nanjundiah V, Queller DC, Strassmann JE, Spiegel FW, Stephenson SL, Vadell EM, Baldauf SL. 2018. A new classification of the dictyostelids. Protist 169:1–28.
  • Silvestro D, Michalak I. 2012. raxmlGUI: a graphical front-end for RAxML. Organisms Diversity & Evolution 12:335–337.
  • Singh R, Schilde C, Schaap P. 2016. A core phylogeny of Dictyostelia inferred from genomes representative of the eight major and minor taxonomic divisions of the group. BMC Evolutionary Biology 16:251.
  • Smith J, Queller DC, Strassmann JE. 2014. Fruiting bodies of the social amoeba Dictyostelium discoideum increase spore transport by Drosophila. BMC Evolutionary Biology 14:105.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30:1312–1313.
  • Stephenson SL, Landolt JC. 1992. Vertebrates as vectors of cellular slime moulds in temperate forests. Mycological Research 96:670–672.
  • Stephenson SL, Laursen GA, Landolt JC, Seppelt RD. 1998. Dictyostelium mucoroides from subantarctic Macquarie Island. Mycologia 90:368–371.
  • Suthers HB. 1985. Ground-feeding migratory songbirds as cellular slime mold distribution vectors. Oecologia 65:526–530.
  • Swanson AR, Vadell EM, Cavender JC. 1999. Global distribution of forest soil dictyostelids. Journal of Biogeography 26:133–148.
  • Vadell E, Cavender JC, Landolt JC, Perrigo AL, Liu P, Stephenson SL. 2018. Five new species of dictyostelid social amoebae (Amoebozoa) from Thailand. BMC Evolutionary Biology 18:198.
  • Wrigley de Basanta D, Lado C, Estrada-Torres A, Stephenson SL. 2013. Biodiversity studies of myxomycetes in Madagascar. Fungal Diversity 59:55–83.