Aphelidium parallelum, sp. nov., a new aphelid parasitic on selenastracean green algae

LITERATURE CITED

• Canter HM. 1969. Studies on British chytrids. XXIX. A taxonomic revision of certain fungi found on the diatom Asterionella. Bot J Linn Soc. 62:267–78.
   Google Scholar
• Capella-Gutiérrez S, Silla-Martínez JM, Gabaldón T. 2009. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics. 25:1972–73.
   PubMed Web of Science ®Google Scholar
• Couch JN. 1935. New or little known Chytridiales. Mycologia. 27:160–75.
   Google Scholar
• Ding Y, Peng X, Wang Z, Wen X, Geng Y, Li Y. 2017. Isolation and characterization of an endoparasite from the culture of oleaginous microalga Graesiella sp. WBG-1. Algal Res. 26:371–79.
   Google Scholar
• Fott B. 1957. Aphelidium chlorococcarum species. nova, ein neuer Parasit in Grünalgen. Biologica. 3:229–37.
   Google Scholar
• Garcia da Silva T, Bock C, Sant’Anna CL, Bagatini IL, Wodniok S, Vieira AAH. 2017. Selenastraceae (Sphaeropleales, Chlorophyceae): rbcL, 18S rDNA and ITS-2 secondary structure enlightens traditional taxonomy, with description of two new genera, Messastrum gen. nov. and Curvastrum gen. nov. Fottea. 17:1–19.
   Web of Science ®Google Scholar
• Gardes M, Bruns TD. 1993. ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Mol Ecol. 2:113–18.
   PubMed Web of Science ®Google Scholar
• Gromov BV. 1972. Aphelidium tribonemae Scherffel parasitizing yellow green algae. Mikol Fitopatol. 6:443–45.
   Google Scholar
• Gromov BV, Mamkaeva KA. 1970. The culture of Aphelidium chlorococcarum Fott f. majus f. nova. Acta Protozool. 7:263–67.
   Google Scholar
• Gromov BV, Mamkaeva KA. 1975. Ultrastructure of zoospores of Aphelidium chlorococcarum Fott. Mikol Fitopatol. 9:190–93.
   Google Scholar
• Guillard RRL, Lorenzen CJ. 1972. Yellow-Green Algae with Chlorophyllide C. J Phycol. 8:10–14.
   Web of Science ®Google Scholar
• Hegewald E. 2000. New combinations in the genus Desmodesmus (Chlorophyceae, Scenedesmaceae). Archiv für Hydrobiologie (Supplement Volumes 131). Arch Hydrobiol Suppl Algol Stud. 96:1–18.
   Google Scholar
• Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE, Huhndorf S, James T, Kirk PM, Lücking R, et al. 2007. A higher-level phylogenetic classification of the Fungi. Mycol Res. 111:509–47.
   PubMed Web of Science ®Google Scholar
• Inaga S, Katsumoto T, Tanaka K, Kameie T, Nakane H, Naguro T. 2007. Platinum blue as an alternative to uranyl acetate for staining in transmission electron microscopy. Arch Histol Cytol. 70:43–49.
   PubMedGoogle Scholar
• Karpov SA, Cvetkova VS, Annenkova NV, Vishnyakov AE. 2019. Kinetid structure of Aphelidium and Paraphelidium (Aphelida) suggests the features of the common ancestor of Fungi and Opisthosporidia. J Eukaryotic Microbiol. 66:911–24.
   PubMed Web of Science ®Google Scholar
• Karpov SA, Mamkaeva MA, Aleoshin VV, Nassonova E, Lilje O, Gleason FH. 2014a. Morphology, phylogeny, and ecology of the aphelids (Aphelidea, Opisthokonta) and proposal for the new superphylum Opisthosporidia. Front Microbiol. 5:112.
   PubMed Web of Science ®Google Scholar
• Karpov SA, Mamkaeva MA, Benzerara K, Moreira D, López-García P. 2014b. Molecular phylogeny and ultrastructure of Aphelidium aff. melosirae (Aphelida, Opisthosporidia). Protist. 165:512–26.
   PubMed Web of Science ®Google Scholar
• Karpov SA, Mamkaeva MA, Moreira D, López-García P. 2016. Molecular phylogeny of Aphelidium tribonemae reveals its sister relationship with A. aff. melosirae (Aphelida, Opisthosporidia). Protistology. 10:97–103.
   Google Scholar
• Karpov SA, Mikhailov KV, Mirzaeva GS, Mirabdullaev IM, Mamkaeva KA, Titova NN, Aleoshin VV. 2013. Obligately phagotrophic aphelids turned out to branch with the earliest-diverging Fungi. Protist. 164:195–205.
   PubMed Web of Science ®Google Scholar
• Karpov SA, Paskerova GG. 2020. The aphelids, intracellular parasitoids of algae, consume the host cytoplasm “from the inside.” Protistology. 14:258–63.
   Google Scholar
• Karpov SA, Tcvetkova VS, Mamkaeva MA, Torruella G, Timpano H, Moreira D, Mamanazarova KS, López-García P. 2017. Morphological and genetic diversity of Opisthosporidia: new aphelid Paraphelidium tribonemae gen. et sp. nov. J Eukaryotic Microbiol. 64:204–12.
   PubMed Web of Science ®Google Scholar
• Karpov SA, Vishnyakov AE, López-García P, Zorina NA, Ciobanu M, Tcvetkova VS, Moreira D. 2020. Morphology and molecular phylogeny of Aphelidium insulamus sp. nov. (Aphelida, Opisthosporidia). Protistology. 14:191–203.
   Google Scholar
• Katoh K, Standley DM. 2013. MAFFT Multiple Sequence Alignment Software Version 7: improvements in Performance and Usability. Mol Biol Evol. 30:772–80.
   PubMed Web of Science ®Google Scholar
• Koch WJ. 1951. Studies in the genus Chytridium, with observations on a sexually reproducing species. J Elisha Mitchell Sci Soc. 67:267–78.
   Google Scholar
• Krienitz L, Bock C, Nozaki H, Wolf M. 2011. SSU rRNA gene phylogeny of morphospecies affiliated to the bioassay alga “Selenastrum capricornutum” recovered the polyphyletic origin of crescent-shaped Chlorophyta. J Phycol. 47:880–93.
   PubMed Web of Science ®Google Scholar
• Lefèvre E, Bardot C, Noël C, Carrias J-F, Viscogliosi E, Amblard C, Sime-Ngando T. 2007. Unveiling fungal zooflagellates as members of freshwater picoeukaryotes: evidence from a molecular diversity study in a deep meromictic lake. Environ Microbiol. 9:61–71.
   PubMed Web of Science ®Google Scholar
• Letcher PM, Lopez S, Schmieder R, Lee PA, Behnke C, Powell MJ, McBride RC. 2013. Characterization of Amoeboaphelidium protococcarum, an algal parasite new to the Cryptomycota isolated from an outdoor algal pond used for the production of biofuel. PLoS ONE. 8:e56232.
   PubMed Web of Science ®Google Scholar
• Letcher PM, Powell MJ. 2019. A taxonomic summary of Aphelidiaceae. IMA Fungus. 10:4.
   PubMed Web of Science ®Google Scholar
• Letcher PM, Powell MJ, Lee PA, Lopez S, Burnett M. 2017. Molecular phylogeny and ultrastructure of Aphelidium desmodesmi, a new species in Aphelida (Opisthosporidia). J Eukaryotic Microbiol. 64:655–67.
   PubMed Web of Science ®Google Scholar
• Luo W, Kotut K, Krienitz L. 2013. Hidden diversity of eukaryotic plankton in the soda lake Nakuru, Kenya, during a phase of low salinity revealed by a SSU rRNA gene clone library. Hydrobiologia. 702:95–103.
   Web of Science ®Google Scholar
• Mamkaeva KA, Gromov BV. 1969. The study of the circle of possible hosts of parasitic microorganisms of Aphelidium–Amoeboaphelidium group. Nauchnye doklady vysshei shkoly. Biol nauki. 8:112–15.
   Google Scholar
• Nakada T. 2018. Methods for supporting cover slip during light microscopy of unfixed microalgae, using clothing fibers or adhesive tapes. Jpn J Phycol. 66:157–63. (in Japanese with English Abstract and Legends).
   Google Scholar
• Nakayama T, Watanabe S, Mitsui K, Uchida H, Inouye I. 1996. The phylogenetic relationship between the Chlamydomonadales and Chlorococcales inferred from 18SrDNA sequence data. Phycol Res. 44:47–55.
   Google Scholar
• Nikouli E, Kormas K, Berillis P, Karayanni H, Moustaka-Gouni M. 2013. Harmful and parasitic unicellular eukaryotes persist in a shallow lake under reconstruction (L. Karla, Greece). Hydrobiologia. 718:73–83.
   Web of Science ®Google Scholar
• O’Donnell K, Cigelnik E, Benny GL. 1998. Phylogenetic relationships among the Harpellales and Kickxellales. Mycologia. 90:624–39.
   Web of Science ®Google Scholar
• Powell MJ. 2017. Chytridiomycota. In: Archibald JM, Simpson AGB, Slamovits CH, editors. Handbook of the Protists. Cham, Switzerland: Springer International Publishing; p. 1523–58.
   Google Scholar
• Powell MJ, Letcher PM. 2014. Chytridiomycota, Monoblepharidomycota and Neocallimastigomycota. In: McLaughlin DJ, Spatafora JW, editors. Systematics and Evolution: part A. Berlin (Heidelberg): Springer Berlin Heidelberg; p. 141–75.
   Google Scholar
• Rehner SA, Samuels GJ. 1994. Taxonomy and phylogeny of Gliocladium analysed from nuclear large subunit ribosomal DNA sequences. Mycol Res. 98:625–34.
   Web of Science ®Google Scholar
• Richards TA, Leonard G, Wideman JG. 2017. What Defines the “Kingdom” Fungi? Microbiol Spectr. 5:FUNK-0044-2017.
   PubMed Web of Science ®Google Scholar
• Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space. Syst Biol. 61:539–42.
   PubMed Web of Science ®Google Scholar
• Schweikert M, Schnepf E. 1996. Pseudaphelidium drebesii, gen et spec nov (incerta sedis), a parasite of the marine centric diatom Thalassiosira punctigera. Archiv für Protistenkunde. 147:11–17.
   Google Scholar
• Seto K, Matsuzawa T, Kuno H, Kagami M. 2020. Morphology, ultrastructure, and molecular phylogeny of Aphelidium collabens sp. nov. (Aphelida), a parasitoid of a green alga Coccomyxa sp. Protist. 171:125728.
   PubMed Web of Science ®Google Scholar
• Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30:1312–13.
   PubMed Web of Science ®Google Scholar
• Tcvetkova VS, Zorina NA, Mamkaeva MA, Karpov SA. 2019. Molecular phylogeny of Aphelidium arduennense sp. nov. – new representative of Aphelida (Opisthosporidia). Protistology. 13:192–98.
   Google Scholar
• Tedersoo L, Sánchez-Ramírez S, Kõljalg U, Bahram M, Döring M, Schigel D, May T, Ryberg M, Abarenkov K. 2018. High-level classification of the Fungi and a tool for evolutionary ecological analyses. Fungal Divers. 90:135–59.
   Web of Science ®Google Scholar
• Torruella G, Grau-Bové X, Moreira D, Karpov SA, Burns JA, Sebé-Pedrós A, Völcker E, López-García P. 2018. Global transcriptome analysis of the aphelid Paraphelidium tribonemae supports the phagotrophic origin of fungi. Commun Biol. 1:231.
   PubMed Web of Science ®Google Scholar
• Venable JH, Coggeshall R. 1965. A simplified lead citrate stain for use in electron microscopy. J Cell Biol. 25:407–08.
   PubMed Web of Science ®Google Scholar
• Vilgalys R, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol. 172:4238–46.
   PubMed Web of Science ®Google Scholar
• White TJ, Bruns T, Lee S, Taylor JL. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR Protocols: a Guide to Methods and Applications. New York, NY: Academic Press; p. 315–22.
   Google Scholar
• Wurzbacher C, Larsson E, Bengtsson‐Palme J, Van den Wyngaert S, Svantesson S, Kristiansson E, Kagami M, Nilsson RH. 2019. Introducing ribosomal tandem repeat barcoding for fungi. Mol Ecol Resour. 19:118–27.
   PubMed Web of Science ®Google Scholar
• Wynne MJ, Hallan JK. 2015. Reinstatement of Tetradesmus G. M. Smith (Sphaeropleales, Chlorophyta). Feddes Repertorium. 126:83–86.
   Google Scholar
• Zopf W. 1885. Zur Morphologie und Biologie der niederen Pilzthiere (Monadinen), zugleich ein Beitrag zur Phytopathologie. Leipzig, Germany: Verlag von Veit & Comp.
   Google Scholar