Modelling storm-event E. coli pulses from the Motueka and Sherry Rivers in the South Island, New Zealand

References

• Anderson CW , Rounds SA 2010 . Use of continuous monitors and autosamplers to predict unmeasured water-quality constituents in tributaries of the Tualatin River , Oregon . US Geological Survey Scientific Investigations Report 2010–5008 .
   Google Scholar
• Auer , MT and Niehaus , SL . 1993 . Modeling faecal coliform bacteria—1. Field and laboratory determination of loss kinetics . Water Research , 27 : 693 – 701 .
   Web of Science ®Google Scholar
• Ballantine D , Davies-Colley RJ , Merrilees R 2011 . Water quality and pollution loads from the Sherry River . NIWA Client Report No. HAM2010 .
   Google Scholar
• Basher LR 2003 . The Motueka and Riwaka catchments . Technical report, LCR Lincoln. Landcare Research , Tasman District Council and Cawthron Institute .
   Google Scholar
• Beven KJ 1987 . Towards a new paradigm in hydrology. Water for the future: hydrology in perspective ( Proceedings of the Rome Symposium, April 1987). IAHS Publ. no. 16 .
   Google Scholar
• Beven , KJ and Freer , J . 2001 . Equifinality, data assimilation, and uncertainty estimation in mechanistic modelling of complex environmental systems . Journal of Hydrology , 249 : 11 – 29 .
   Web of Science ®Google Scholar
• Biskie HA , Sherer BM , Moore JA , Miner JR , Buckhouse JM 1988 . Fate of manure point loading into a rangeland stream . ASAE Paper 88-2081 . ASAE, St. Joseph, Michigan .
   Google Scholar
• Campbell N , D'Arcy B , Frost A , Novotny V , Sansom A 2004 . Diffuse pollution: an introduction to the problems and solutions . London , IWA Publishing .
   Google Scholar
• Collins , R and Rutherford , K . 2004 . Modelling bacterial water quality in streams draining pastoral land . Water Research , 38 : 3700 – 712 .
   Web of Science ®Google Scholar
• Cornelisen CD , Gillespie P , Kirs M , Young RG , Forrest R , Barter P , Knight B , Harwood VJ 2011 . Motueka River plume facilitates transport of ruminant faecal contaminants into shellfish growing waters, Tasman Bay, New Zealand . New Zealand Journal of Marine and Freshwater Research 45 : 477 – 495 .
   Web of Science ®Google Scholar
• Davies-Colley , RJ , Nagels , JW and Lydiard , E . 2008 . Faecal bacterial dynamics and yields from an intensively dairy-farmed catchment . Water Science and Technology , 57 : 1519 – 1523 .
   PubMed Web of Science ®Google Scholar
• Davies-Colley , RJ , Nagels , JW , Smith , R , Young , R and Phillips , C . 2004 . Water quality impacts of a dairy cow herd crossing a stream . New Zealand Journal of Marine and Freshwater Research , 38 : 569 – 576 .
   Web of Science ®Google Scholar
• Davies-Colley , RJ and Nagels , JW . 2008 . Predicting light penetration into river waters . Journal of Geophysical Research , 113 : G03028
   Web of Science ®Google Scholar
• Dennison , WC , Lookingbill , TR , Carruthers , TJB , Hawkey , JM and Carter , SL . 2007 . An eye-opening approach to developing and communicating integrated environmental assessments . Frontiers in Ecology and the Environment , 5 : 307 – 314 .
   Web of Science ®Google Scholar
• Environment Agency 2000 . The microbiology of recreational and environmental waters: methods for the enumeration of waters and associated material . standing committee of analysts . Bristol , The Environment Agency .
   Google Scholar
• Fenemor A , Phillips C , Allen W , Young RG , Harmsworth G , Bowden W , Basher L , Gillespie P , Kilvington M , Davies-Colley R , Dymond J , Cole A , Lauder G , Davie T , Smith R , Markham S , Deans N , Stuart B , Atkinson M , Collins A. Integrated catchment management—interweaving social process and science knowledge . New Zealand Journal of Marine and Freshwater Research 45 : 307 – 311 .
   Web of Science ®Google Scholar
• Gameson ALH , Gould DJ 1975 . Effects of solar radiation on the mortality of some terrestrial bacteria in sea water . In : Gameson ALH . Proceedings of the International Symposium on Discharge of Sewage from Sea Outfalls . London , Pergamon Press .
   Google Scholar
• Garcia , M , Nino , Y and Lopez , F . 1996 . “ Laboratory observations of particle entrainment into suspension by turbulent bursting ” . In Coherent flow structures in open channels , Edited by: Ashworth , PJ , Bennet , SJ , Best , JL and McLelland , SJ . New York : John Wiley .
   Google Scholar
• Graham , AA . 1990 . Siltation of stone-surface periphyton in rivers by clay-sized particles from low concentrations in suspension . Hydrobiologia , 199 : 107 – 115 .
   Web of Science ®Google Scholar
• Henderson-Sellers B , Young PC , Ribiero da Costa J 1988 . Water quality models: rivers and reservoirs . In: Proceedings of the International Symposium on Water Quality Modelling of Agricultural Non-point Sources, Part 1 . Logan, UT , Utah State University , ARS-81
   Google Scholar
• Hipsey , MR , Antenucci , JP and Brookes , JD . 2008 . A generic, process-based model of microbial pollution in aquatic systems . Water Resources Research , 44 : W07408
   Web of Science ®Google Scholar
• Hunter , C , McDonald , AT and Beven , KJ . 1992 . Input of faecal coliform bacteria to an upland stream channel in the Yorkshire Dales . Water Resources Research , 2.8 : 1869 – 1876 .
   Web of Science ®Google Scholar
• Jamieson , R , Gordon , R , Joy , D and Lee , H . 2004 . Assessing microbial pollution of rural surface waters—a review of current watershed scale modeling approaches . Agricultural Water Management , 70 : 1 – 17 .
   Web of Science ®Google Scholar
• Jeje , LK , Ogunkoya , O and Oluwatimilehin , JM . 1991 . Variation in suspended sediment concentration during storm discharges in three small streams in the upper Osun Basin, Central Western Nigeria . Hydrological Processes , 5 : 361 – 369 .
   Web of Science ®Google Scholar
• Jenkins A 1984 . The effect of fluvial processes on the dynamics of sanitary bacteria in upland streams . Unpublished PhD thesis, University of Leeds .
   Google Scholar
• Jenkins , A , Kirkby , MJ , McDonald , AT , Naden , P and Kay , D . 1984 . A process based model of faecal bacterial levels in upland catchments . Water Science and Technology , 16 : 453 – 462 .
   Web of Science ®Google Scholar
• Kay D , McDonald AT 1980 . Towards an understanding of the effects of catchment management on water quality . Technical Paper , Lancaster IBG .
   Google Scholar
• Kay , D , McDonald , A , Stapleton , C , Wyer , M and Fewtrell , L . 2006 . Europe: a challenging new framework for water quality . Proceedings of ICE Civil Engineering , 159 : 58 – 64 .
   Web of Science ®Google Scholar
• Kay , D , Edwards , AC , Ferrier , B , Francis , C , Kay , C , Rushby , L , Watkins , J , McDonald , AT , Wyer , MD , Crowther , J and Wilkinson , J . 2007 . Catchment microbial dynamics: the emergence of a research agenda . Progress in Physical Geography , 31 : 59 – 76 .
   Web of Science ®Google Scholar
• Kay , D , Crowther , J , Stapleton , CM , Wyer , MD , Anthony , S , Bradford , M , Edwards , A , Fewtrell , L , Francis , C , Hopkins , M , Kay , C , McDonald , AT , Watkins , J and Wilkinson , J . 2008 . Faecal indicator organism concentrations and catchment export coefficients in the UK . Water Research , 42 : 2649 – 2661 .
   PubMed Web of Science ®Google Scholar
• Kirk , JTO . 1994 . Light and photosynthesis in aquatic ecosystems , New York : Cambridge University Press .
   Google Scholar
• McBride , GB . 2011 . Explaining differential sources of zoonotic pathogens in intensively-farmed catchments using kinematic waves . Water Science and Technology , 63 : 695 – 703 .
   PubMed Web of Science ®Google Scholar
• McDonald , AT , Kay , D and Jenkins , A . 1982 . Generation of faecal and total coliform surges by stream flow manipulation in the absence of normal hydrometeorological stimuli . Applied Environmental Microbiology , 44 : 292 – 300 .
   PubMed Web of Science ®Google Scholar
• McKergow , LA and Davies-Colley , RJ . 2010 . Stormflow dynamics and loads of Escherichia coli in a large mixed land use catchment . Hydrological Processes , 24 : 276 – 289 .
   Web of Science ®Google Scholar
• Morowitz , HJ . 1950 . Absorption effects in volume irradiation of micro-organisms . Science , 111 : 229 – 230 .
   PubMed Web of Science ®Google Scholar
• Muirhead , RW , Davies-Colley , RJ , Donnison , AM and Nagels , JW . 2004 . Faecal bacteria yields in artificial flood events: quantifying in-stream stores . Water Research , 38 : 1215 – 1224 .
   PubMed Web of Science ®Google Scholar
• Nagels , JW , Davies-Colley , RJ , Donnison , AM and Muirhead , RW . 2002 . Faecal contamination over flood events in a pastoral agricultural stream in New Zealand . Water Science and Technology , 45 : 45 – 52 .
   PubMed Web of Science ®Google Scholar
• Nash , JE and Sutcliffe , JV . 1970 . River flow forecasting through conceptual models, Part I—A discussion of principles . Journal of Hydrology , 10 : 282 – 290 .
   Google Scholar
• Pommepuy , M , Guillaud , JF , Dupray , E , Derrien , A , Le Guyader , F and Cormier , M . 1992 . Enteric bacteria survival factors . Water Science and Technology , 25 : 93 – 103 .
   Web of Science ®Google Scholar
• Pope , ML , Bussen , M , Feige , MA , Shadix , L , Gonder , S , Rodgers , C , Chambers , Y , Pulz , J , Miller , K , Connell , K and Standridge , J . 2003 . Assessment of the effects of holding time and temperature on E. coli densities in surface water samples . Applied Environmental Microbiology , 69 : 6201 – 6207 .
   PubMed Web of Science ®Google Scholar
• Price , LE , Goodwill , P , Young , PC and Rowan , JS . 2000 . A data-based mechanistic modelling (DBM) approach to understanding dynamic sediment transmission through Wyresdale Park Reservoir, Lancashire, UK . Hydrological Processes , 14 : 63 – 78 .
   Web of Science ®Google Scholar
• Qin , D , Bliss , JP , Barnes , D and FitzGerald , PA . 1991 . Bacterial (total coliform) die-off in maturation ponds . Water Science and Technology , 23 : 1525 – 1534 .
   Web of Science ®Google Scholar
• Reynolds , CS , Carling , PA and Beven , KJ . 1991 . Flow in river channels: new insights into hydraulic retention . Archives of Hydrobiology , 121 : 171 – 179 .
   Google Scholar
• Richardson , K and Carling , PA . 2006 . The hydraulics of a straight bedrock channel: insights from solute dispersion studies . Geomorphology , 82 : 98 – 125 .
   Web of Science ®Google Scholar
• Sarikaya , HZ , Asce , AM , Saatci , AM and Abdulfattah , AF . 1987 . Effect of pond depth on bacterial die-off . Journal of Environmental Engineering , 113 : 1350 – 1362 .
   Web of Science ®Google Scholar
• Solo-Gabriele , HM , Wolfert , MA , Desmarais , TR and Palmer , CJ . 2000 . Sources of Escherichia coli in a coastal subtropical environment . Applied Environmental Microbiology , 66 : 230 – 237 .
   PubMed Web of Science ®Google Scholar
• Stadler , H , Skritek , P , Sommer , R , Mach , RL , Zerobin , W and Farnleitner , AH . 2008 . Microbiological monitoring and automated event sampling at Karst Springs using LEO-satellites . Water Science & Technology , 58 : 899 – 909 .
   PubMed Web of Science ®Google Scholar
• Stott , R , Davies-Colley , R , Nagels , J , Donnison , A , Ross , C and Muirhead , R . 2011 . Differential behaviour of Escherichia coli and Campylobacter spp. in a stream draining dairy pasture . Journal of Water and Health , 09 : 59 – 69 .
   Web of Science ®Google Scholar
• VanSickle , J and Beschta , RL . 1983 . Supply limited models of sediment transport in streams . Water Resources Research , 19 : 768 – 778 .
   Web of Science ®Google Scholar
• Wallis , SG , Crowther , JM , Curran , JC , Milne , DP and Findlay , JS . 1989 . “ Consideration of one-dimensional transport model of the Upper Clyde Estuary ” . In Advances in water modelling and measurement , Edited by: Palmer , HA . Cranfield : BHRA .
   Google Scholar
• Wilkinson J 2001 . Modelling faecal coliform dynamics in streams and rivers . Unpublished PhD thesis , University of Wales , Aberystwyth .
   Google Scholar
• Wilkinson J 2008 . Faecal indicator organism modelling (FIO): application to Motueka River . Prepared for Integrated Catchment Management project. Cawthron Report No. 1454 .
   Google Scholar
• Wilkinson , J , Jenkins , A , Wyer , M and Kay , D . 1995 . Modelling faecal coliform dynamics in streams and rivers . Water Research , 29 : 847 – 855 .
   Web of Science ®Google Scholar
• Wilkinson , J , Kay , D , Wyer , M and Jenkins , A . 2006 . Processes driving the episodic flux of faecal indicator organisms in streams impacting on recreational and shellfish harvesting waters . Water Research , 40 : 153 – 161 .
   PubMed Web of Science ®Google Scholar
• Wyer M , Kay D , Stapleton C , Watkins J , Davies C , Moore H 2009 . An investigation into bathing water quality at Amroth, Pembrokeshire . CREH Report to Welsh Environment Agency .
   Google Scholar
• Young , RG , Quarterman , AJ , Eyles , RF , Smith , RA and Bowden , WB . 2005 . Water quality and thermal patterns of the Motueka River: influences of land cover, geology and position in the catchment . New Zealand Journal of Marine and Freshwater Research , 39 : 803 – 825 .
   Web of Science ®Google Scholar