998
Views
11
CrossRef citations to date
0
Altmetric
Plant nutrition

Autophagy is induced under Zn limitation and contributes to Zn-limited stress tolerance in Arabidopsis (Arabidopsis thaliana)

, , &
Pages 342-350 | Received 07 Apr 2017, Accepted 24 Jul 2017, Published online: 06 Sep 2017

References

  • Avin-Wittenberg T, Bajdzienko K, Wittenberg G, Alseekh S, Tohge T, Bock R, Giavalisco P, Fernie AR 2015: Global analysis of the role of autophagy in cellular metabolism and energy homeostasis in Arabidopsis seedlings under carbon starvation. Plant Cell, 27, 306–322. doi:10.1105/tpc.114.134205
  • Broadley MR, White PJ, Hammond JP, Zelko I, Lux A 2007: Zinc in plants. New Phytol., 173, 677–702. doi:10.1111/j.1469-8137.2007.01996.x
  • Cakmak I 2000: Tansley review No. 111 Possible roles of zinc in protecting plant cells from damage by reactive oxygen species. New Phytol., 146, 185–205. doi:10.1046/j.1469-8137.2000.00630.x
  • Chung T, Phillips AR, Vierstra RD 2010: ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A and ATG12B loci. Plant J., 62, 483–493. doi:10.1111/j.1365-313X.2010.04166.x
  • Dickman MB, Fluhr R 2013: Centrality of host cell death in plant-microbe interactions. Annu. Rev. Phytopathol., 51, 543–570. doi:10.1146/annurev-phyto-081211-173027
  • Doelling JH, Walker JM, Friedman EM, Thompson AR, Vierstra RD 2002: The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thaliana. J. Biol. Chem., 277, 33105–33114. doi:10.1074/jbc.M204630200
  • Guiboileau A, Yoshimoto K, Soulay F, Bataillé MP, Avice JC, Masclaux-Daubresse C 2012: Autophagy machinery controls nitrogen remobilization at the whole-plant level under both limiting and ample nitrate conditions in Arabidopsis. New Phytol., 194, 732–740. doi:10.1111/j.1469-8137.2012.04084.x
  • Hanaoka H, Noda T, Shirano Y, Kato T, Hayashi H, Shibata D, Tabata S, Ohsumi Y 2002: Leaf senescence and starvation-induced chlorosis are accelerated by the disruption of an Arabidopsis autophagy gene. Plant Physiol., 129, 1181–1193. doi:10.1104/pp.011024
  • Ishida H, Izumi M, Wada S, Makino A 2014: Roles of autophagy in chloroplast recycling. Biochim. Biophys. Acta., 1837, 512–521. doi:10.1016/j.bbabio.2013.11.009
  • Ishida H, Yoshimoto K, Izumi M, Reisen D, Yano Y, Makino A, Ohsumi Y, Hanson MR, Mae T 2008: Mobilization of Rubisco and stroma-localized fluorescent proteins of chloroplasts to the vacuole by an ATG gene-dependent autophagic process. Plant Physiol., 148, 142–155. doi:10.1104/pp.108.122770
  • Juszczak I, Baier M 2014: Quantification of superoxide and hydrogen peroxide in leaves. Methods Mol. Biol., 1166, 217–224. doi:10.1007/978-1-4939-0844-8_16
  • Kawamata T, Horie T, Matsunami M, Sasaki M, Ohsumi Y 2017: Zinc starvation induces autophagy in yeast. J. Biol. Chem., 292, 8520-8530. doi:10.1074/jbc.M116.762948
  • Li F, Chung T, Pennington JG, Federico ML, Kaeppler HF, Kaeppler SM, Otegui MS, Vierstra RD 2015: Autophagic recycling plays a central role in maize nitrogen remobilization. Plant Cell, 27, 1389–1408. doi:10.1105/tpc.15.00158
  • Lin YF, Liang HM, Yang SY, Boch A, Clemens S, Chen CC, Wu JF, Huang JL, Yeh KC 2009: Arabidopsis IRT3 is a zinc-regulated and plasma membrane localized zinc/iron transporter. New Phytol., 182, 392–404. doi:10.1111/j.1469-8137.2009.02766.x
  • Merkulova EA, Guiboileau A, Naya L, Masclaux-Daubresse C, Yoshimoto K 2014: Assessment and optimization of autophagy monitoring methods in Arabidopsis roots indicate direct fusion of autophagosomes with vacuoles. Plant Cell Physiol., 55, 715–726. doi:10.1093/pcp/pcu041
  • Nakatogawa H, Suzuki K, Kamada Y, Ohsumi Y 2009: Dynamics and diversity in autophagy mechanisms: lessons from yeast. Nat. Rev. Mol. Cell Biol., 10, 458–467. doi:10.1038/nrm2708
  • Nakayama M, Kaneko Y, Miyazawa Y et al. 2012: A possible involvement of autophagy in amyloplast degradation in columella cells during hydrotropic response of Arabidopsis roots. Planta, 236, 999–1012. doi:10.1007/s00425-012-1655-5
  • Ono Y, Wada S, Izumi M, Makino A, Ishida H 2013: Evidence for contribution of autophagy to rubisco degradation during leaf senescence in Arabidopsis thaliana. Plant Cell Environ., 36, 1147–1159. doi:10.1111/pce.12049
  • Phillips AR, Suttangkakul A, Vierstra RD 2008: The ATG12-conjugating enzyme ATG10 is essential for autophagic vesicle formation in Arabidopsis thaliana. Genetics, 178, 1339–1353. doi:10.1534/genetics.107.086199
  • Rose TL, Bonneau L, Der C, Marty-Mazars D, Marty F 2006: Starvation-induced expression of autophagy-related genes in Arabidopsis. Biol. Cell., 98, 53–67. doi:10.1042/BC20040516
  • Sakamoto T, Kamiya T, Sako K, Yamaguchi J, Yamagami M, Fujiwara T 2011: Arabidopsis thaliana 26S proteasome subunits RPT2a and RPT5a are crucial for zinc deficiency-tolerance. Biosci. Biotechnol. Biochem., 75, 561–567. doi:10.1271/bbb.100794
  • Shirahama K, Yazaki Y, Sakano K, Wada Y, Ohsumi Y 1996: Vacuolar function in the phosphate homeostasis of the yeast Saccharomyces cerevisiae. Plant Cell Physiol., 37, 1090–1093. doi:10.1093/oxfordjournals.pcp.a029058
  • Suttangkakul A, Li F, Chung T, Vierstra RD 2011: The ATG1/ATG13 protein kinase complex is both a regulator and a target of autophagic recycling in Arabidopsis. Plant Cell, 23, 3761–3779. doi:10.1105/tpc.111.090993
  • Suzuki NN, Yoshimoto K, Fujioka Y, Ohsumi Y, Inagaki F 2005: The crystal structure of plant ATG12 and its biological implication in autophagy. Autophagy, 1, 119–126. doi:10.4161/auto.1.2.1859
  • Takeshige K, Baba M, Tsuboi S, Noda T, Ohsumi Y 1992: Autophagy in yeast demonstrated with proteinase-deficient mutants and conditions for its induction. J. Cell Biol., 119, 301–311. doi:10.1083/jcb.119.2.301
  • Tasaki M, Asatsuma S, Matsuoka K 2014: Monitoring protein turnover during phosphate starvation-dependent autophagic degradation using a photoconvertible fluorescent protein aggregate in tobacco BY-2 cells. Front Plant Sci., 5, 172. doi:10.3389/fpls.2014.00172
  • Thompson AR, Doelling JH, Suttangkakul A, Vierstra RD 2005: Autophagic nutrient recycling in Arabidopsis directed by the ATG8 and ATG12 conjugation pathways. Plant Physiol., 138, 2097–2110. doi:10.1104/pp.105.060673
  • Tsukada M, Ohsumi Y 1993: Isolation and characterization of autophagy-defective mutants of Saccharomyces cerevisiae. FEBS Lett., 333, 169–174. doi:10.1016/0014-5793(93)80398-E
  • Wada S, Hayashida Y, Izumi M et al. 2015: Autophagy supports biomass production and nitrogen use efficiency at the vegetative stage in rice. Plant Physiol., 168, 60–73. doi:10.1104/pp.15.00242
  • Wintz H, Fox T, Wu YY, Feng V, Chen W, Chang HS, Zhu T, Vulpe C 2003: Expression profiles of Arabidopsis thaliana in mineral deficiencies reveal novel transporters involved in metal homeostasis. J. Biol. Chem., 278, 47644–47653. doi:10.1074/jbc.M309338200
  • Xiong Y, Contento AL, Nguyen PQ, Bassham DC 2007: Degradation of oxidized proteins by autophagy during oxidative stress in Arabidopsis. Plant Physiol., 143, 291–299. doi:10.1104/pp.106.092106
  • Yoshimoto K 2012: Beginning to understand autophagy, an intracellular self-degradation system in plants. Plant Cell Physiol., 53, 1355–1365. doi:10.1093/pcp/pcs099
  • Yoshimoto K, Hanaoka H, Sato S, Kato T, Tabata S, Noda T, Ohsumi Y 2004: Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy. Plant Cell, 16, 2967–2983. doi:10.1105/tpc.104.025395
  • Yoshimoto K, Jikumaru Y, Kamiya Y, Kusano M, Consonni C, Panstruga R, Ohsumi Y, Shirasu K 2009: Autophagy negatively regulates cell death by controlling NPR1-dependent salicylic acid signaling during senescence and the innate immune response in Arabidopsis. Plant Cell, 21, 2914–2927. doi:10.1105/tpc.109.068635
  • Yoshimoto K, Takano Y, Sakai Y 2010: Autophagy in plants and phytopathogens. FEBS Lett., 584, 1350–1358. doi:10.1016/j.febslet.2010.01.007
  • Zientara-Rytter K, Lukomska J, Moniuszko G, Gwozdecki R, Surowiecki P, Lewandowska M, Liszewska F, Wawrzyńska A, Sirko A 2011: Identification and functional analysis of Joka2, a tobacco member of the family of selective autophagy cargo receptors. Autophagy, 7, 1145–1158. doi:10.4161/auto.7.10.16617

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.