Haplotype analysis of the polymorphic 24 Y-STR markers in six ethnic populations from China

References

• Budowle B , Ge J , Aranda XG , Planz JV , Eisenberg AJ , Chakraborty R . Texas population substructure and its impact on estimating the rarity of Y STR haplotypes from DNA evidence*. J Forensic Sci. 2009;54:1016–1021. 10.1111/jfo.2009.54.issue-5
   PubMed Web of Science ®Google Scholar
• Xu H , Wang CC , Shrestha R , Wang LX , Zhang M , He Y , Kidd JR , Kidd KK , Jin L , Li H . Inferring population structure and demographic history using Y-STR data from worldwide populations. Mol Genet Genomics. 2015;290:141–150.
   PubMed Web of Science ®Google Scholar
• van Oven M , Toscani K , van den Tempel N , Ralf A , Kayser M . Multiplex genotyping assays for fine-resolution subtyping of the major human Y-chromosome haplogroups E, G, I, J, and R in anthropological, genealogical, and forensic investigations. Electrophoresis. 2013;34:3029–3038.
   PubMed Web of Science ®Google Scholar
• Toscanini U , Brisighelli F , Moreno F , Pantoja-Astudillo JA , Morales EA , Bustos P , Pardo-Seco J , Salas A . Analysis of Y-chromosome STRs in Chile confirms an extensive introgression of European male lineages in urban populations. Forensic Sci Int Genet. 2016;21:76–80. 10.1016/j.fsigen.2015.12.005
   PubMed Web of Science ®Google Scholar
• Larmuseau MH , Vessi A , Jobling MA , Van Geystelen A , Primativo G , Biondi G , Martinez-Labarga C , Ottoni C , Decorte R , Rickards O . The paternal landscape along the Bight of Benin - testing regional representativeness of West-African population samples using y-chromosomal markers. Plos One. 2015;10:e141510.
   PubMed Web of Science ®Google Scholar
• Ou X , Wang Y , Liu C , Yang D , Zhang C , Deng S , Sun H . Haplotype analysis of the polymorphic 40 Y-STR markers in Chinese populations. Forensic Sci Int Genet. 2015;19:255–262. 10.1016/j.fsigen.2015.08.007
   PubMed Web of Science ®Google Scholar
• Gusmão L , Butler JM , Carracedo A , Gill P , Kayser M , Mayr WR , Morling N , Prinz M , Roewer L , Tyler-Smith C , Schneider PM . DNA commission of the international society of forensic genetics (ISFG): an update of the recommendations on the use of Y-STRs in forensic analysis. Int J Legal Med. 2006;120:191–200. 10.1007/s00414-005-0026-1
   PubMed Web of Science ®Google Scholar
• Zhivotovsky LA . Estimating population structure in diploids with multilocus dominant DNA markers. MOL ECOL. 1999;8:907–913. 10.1046/j.1365-294x.1999.00620.x
   PubMed Web of Science ®Google Scholar
• Budowle B , Adamowicz M , Aranda XG , Barna C , Chakraborty R , Cheswick D , Dafoe B , Eisenberg A , Frappier R , Gross AM , et al . Twelve short tandem repeat loci Y chromosome haplotypes: genetic analysis on populations residing in North America. Forensic Sci Int. 2005;150:1–15. 10.1016/j.forsciint.2005.01.010
   PubMed Web of Science ®Google Scholar
• Slatkin M . A measure of population subdivision based on microsatellite allele frequencies. Genetics. 1995;139:457–462.
   PubMed Web of Science ®Google Scholar
• Wang Y , Liu C , Zhang CC , Li R , Liu H , Ou XL , Li HX , Sun HY . Analysis of 24 Y-STR haplotype data in a Chinese Han population from Guangdong Province. Int J Legal Med. 2016;130:689–691. 10.1007/s00414-015-1301-4
   PubMed Web of Science ®Google Scholar
• Shi M , Liu Y , Zhang J , Bai R , Lv X , Ma S . Analysis of 24 Y chromosomal STR haplotypes in a Chinese Han population sample from Henan Province. Forensic Sci Int Genet. 2015;17:83–86. 10.1016/j.fsigen.2015.04.001
   PubMed Web of Science ®Google Scholar
• Kim SH , Kim NY , Hong SB , Cho NS , Kim JJ , Han MS , Kim W . Genetic polymorphisms of 16 Y chromosomal STR loci in Korean population. Forensic Sci Int Genet. 2008;2:e9–e10. 10.1016/j.fsigen.2007.11.001
   PubMedGoogle Scholar
• Chang YM , Perumal R , Keat PY , Kuehn DL . Haplotype diversity of 16 Y-chromosomal STRs in three main ethnic populations (Malays, Chinese and Indians) in Malaysia. Forensic Sci Int. 2007;167:70–76. 10.1016/j.forsciint.2006.01.002
   PubMed Web of Science ®Google Scholar
• Butler JM , Decker AE , Kline MC , Vallone PM . Chromosomal duplications along the Y-chromosome and their potential impact on Y-STR interpretation. J Forensic Sci. 2005;50:853–859.
   PubMed Web of Science ®Google Scholar
• Budowle B , Ge J , Aranda XG , Planz JV , Eisenberg AJ , Chakraborty R . Texas population substructure and its impact on estimating the rarity of Y STR haplotypes from DNA evidence*. J Forensic Sci. 2009;54:1016–1021. 10.1111/jfo.2009.54.issue-5
   PubMed Web of Science ®Google Scholar
• Ge J , Budowle B , Planz JV , Eisenberg AJ , Ballantyne J , Chakraborty R . US forensic Y-chromosome short tandem repeats database. Leg Med. 2010;12:289–295. 10.1016/j.legalmed.2010.07.006
   PubMed Web of Science ®Google Scholar
• Budowle B , Ge J , Low J , Lai C , Yee WH , Law G , Tan WF , Chang YM , Perumal R , Keat PY , et al . The effects of Asian population substructure on Y STR forensic analyses. Leg Med. 2009;11:64–69. 10.1016/j.legalmed.2008.08.003
   PubMedGoogle Scholar
• Balding DJ , Nichols RA . DNA profile match probability calculation: how to allow for population stratification, relatedness, database selection and single bands. Forensic Sci Int. 1994;64:125–140. 10.1016/0379-0738(94)90222-4
   PubMed Web of Science ®Google Scholar
• Hering S , Brundirs N , Kuhlisch E , Edelmann J , Plate I , Benecke M , Van PH , Michael M , Szibor R . DXS10011: studies on structure, allele distribution in three populations and genetic linkage to further q-telomeric chromosome X markers. Int J Leg Med. 2004;118:313–319. 10.1007/s00414-004-0467-y
   PubMed Web of Science ®Google Scholar