Hierarchical Approaches to Genome Evolution

Literature Cited

• Arnold , A. J. and Fristrup , K. 1982 . ‘The Theory of Evolution by Natural Selection: A Hierarchical Expansion,’ . Paleobiology , 8 : 113 – 29 .
   Web of Science ®Google Scholar
• Bernardi , G. and Bernardi , G. 1986 . ‘Compositional Constraints and Genome Evolution,’ . Journal of Molecular Evolution , 24 : 1 – 11 .
   PubMed Web of Science ®Google Scholar
• Bohr , V. A. , Smith , C. A. , Okumoto , D. S. and Hanawalt , P. C. 1985 . ‘DNA Repair in an Active Gene: Removal of Pyrimidine Dimers from the DHFR Gene of CHO Cells is Much More Efficient than in the Genome Overall,’ . Cell , 40 : 359 – 69 .
   PubMed Web of Science ®Google Scholar
• Brandon , R. N. and Burian , R. M. 1984 . Genes, Organisms, Populations: Controversies over the Units of Selection Cambridge , Ma : MIT Press .
   Google Scholar
• Britten , R. J. 1986 . ‘Rates of DNA Sequence Evolution Differ Between Taxonomic Groups,’ . Science , 231 : 1393 – 8 .
   PubMed Web of Science ®Google Scholar
• Britten , R. J. and Davidson , E. H. 1971 . ‘Repetitive and Non-Repetitive DNA Sequences and a Speculation on the Origins of Evolutionary Novelty,’ . Quarterly Review of Biology , 46 : 111 – 37 .
   PubMed Web of Science ®Google Scholar
• Campbell , J. H. 1985 . Evolution at a Crossroads: The New Biology and the New Philosophy of Science Edited by: Depew , D. J. and Wever , B. H. 133 – 67 . Cambridge , Ma : MIT Press . ‘An Organizational Interpretation of Evolution.’ In
   Google Scholar
• Cavalier-Smith , T. 1985 . The Evolution of Genome Size Chichester , , England : John Wiley and Sons .
   Google Scholar
• Darnell , J. E. and Doolitte , W. F. 1986 . ‘Speculations on the Early Course of Evolution,’ . Proceedings of the National Academy of Science, U.S.A. , 83 : 1271 – 5 .
   PubMed Web of Science ®Google Scholar
• Darnell , J. , Lodish , H. and Baltimore , D. 1986 . Molecular Cell Biology New York : W.H. Freeman . [Scientific American Books]).
   Google Scholar
• Darwin , C. 1888 . The Various Contrivances by which Orchids are Fertilized by Insects New York : D. Appleton . 2nd ed. Quotation taken from Ghiselin (1969).
   Google Scholar
• Davis , B. D. 1961 . ‘The Teleonomic Significance of Biosynthetic Control Mechanisms,’ . Cold Spring Harbor Symp. Quant. Biol. , 26 : 1 – 10 .
   PubMedGoogle Scholar
• Davidson , E. H. and Britten , R. J. 1979 . ‘Regulation of Gene Expression: Possible Role of Repetitive Sequences,’ . Science , 202 : 1257 – 60 .
   Google Scholar
• Dawkins , R. 1976 . The Selfish Gene New York : Oxford University Press .
   Google Scholar
• Doolittle , W. F. 1978 . ‘Genes-in-Pieces, Were They Ever Together?’ . Nature , 272 : 581 – 2 .
   Web of Science ®Google Scholar
• Doolittle , W. F. 1988 . ‘The Origin and Function of Intervening Sequences in DNA (a review),’ . American Naturalist , 130 : 915 – 28 . 6
   Google Scholar
• Doolittle , W. F. and Sapienza , C. 1980 . ‘Selfish Genes, The Phenotype Paradigm and Genome Evolution,’ . Nature , 284 : 601 – 3 .
   PubMed Web of Science ®Google Scholar
• Dover , G. A. 1982 . ‘Molecular Drive: A Cohesive Mode of Species Evolution,’ . Nature , 299 : 111 – 17 .
   PubMed Web of Science ®Google Scholar
• Dover , G. A. and Flavell , R. B. 1982 . Genome Evolution New York : Academic Press .
   Google Scholar
• Drake , W. J. , Glickman , B. W. and Ripley , L. S. 1983 . American Scientist 621 – 30 . ‘Updating the Theory of Mutation,’ (Nov.-Dec.)
   Google Scholar
• Eldredge , N. 1985 . Unfinished Synthesis: Biological Hierarchies and Modern Evolutionary Thought New York : Oxford University Press .
   Google Scholar
• Eldredge , N. and Gould , S. J. 1972 . Models in Paleobiology Edited by: Schopf , T. J.M. 82 – 115 . San Francisco : W.H. Freeman . ‘Punctuated Equilibria: An Alternative to Phyletic Gradualism.’ In
   Google Scholar
• Ghiselin , M. T. 1974 . ‘A Radical Solution to the Species Problem,’ . Systematic Zoology , 23 : 536 – 44 .
   Google Scholar
• Ghiselin , M. 1979 . The Triumph of the Darwinian Method Chicago : University of Chicago Press .
   Google Scholar
• Gilbert , W. 1978 . ‘Why Genes in Pieces?’ . Nature , 271 : 501
   PubMed Web of Science ®Google Scholar
• Gould , S. J. 1982 . ‘Darwinism and the Expansion of Evolutionary Theory,’ . Science , 216 : 380 – 7 .
   PubMed Web of Science ®Google Scholar
• Gould , S. J. and Eldredge , N. 1977 . ‘Punctuated Equilibria: The Tempo and Mode of Evolution Reconsidered,’ . Paleobiology , 3 : 115 – 51 .
   Google Scholar
• Gould , S. J. and Lewontin , R. C. 1979 . Proceedings of the Royal Society, London , 205B : 581 – 98 . ‘The Spandrels of San Marco and the Panglossian Paradigm: A Critique of the Adaptationist Programme.
   Google Scholar
• Gould , S. J. and Vrba , E. 1982 . ‘Exaptation—A Missing Term in the Science of Form,’ . Paleobiology , 8 : 4 – 15 .
   Web of Science ®Google Scholar
• Hinegardner , R. 1977 . Molecular Evolution Edited by: Ayala , F. J. 179 – 99 . Sunderland , Ma : Sinauer Associates . ‘Evolution of Genome Size.’ In
   Google Scholar
• Hull , D. 1976 . ‘Are Species Really Individuals?’ . Systematic Zoology , 25 : 174 – 91 .
   Google Scholar
• Hull , D. 1981 . The Philosophy of Evolution Edited by: Jensen , U. L. and Harre , R. 23 – 44 . Brighton : Harvester Press . ‘Units of Evolution: A Metaphysical Essay.’ In
   Google Scholar
• Hull , D. 1984 . Genes, Organisms and Populations: Controversies over the Units of Selection Edited by: Brandon , R. N. and Burian , R. M. Cambridge , Ma : MIT Press . ‘Units of Evolution: A Metaphysical Essay.’ In.
   Google Scholar
• Jacob , F. 1977 . ‘Evolution and Tinkering,’ . Science , 196 : 1161 – 6 .
   PubMed Web of Science ®Google Scholar
• Jacob , F. 1982 . The Possible and the Actual New York : Pantheon Books .
   Google Scholar
• Kimura , M. 1968 . ‘Evolutionary Rate at the Molecular Level,’ . Nature , 217 : 624 – 6 .
   PubMed Web of Science ®Google Scholar
• Maynard Smith , J. 1976 . The Evolution of Sex Cambridge : Cambridge University Press .
   Google Scholar
• Maynard Smith , J. 1982 . Genome Evolution Edited by: Dover , G. A. and Flavell , R. B. 375 – 82 . New York : Academic Press . Overview—Unsolved Evolutionary Problems.’ In
   Google Scholar
• Maynard Smith , J. , Burian , R. , Kauffman , S. , Alberch , P. , Campbell , J. , Goodwin , B. , Lande , R. , Raup , D. and Wolpert , L. 1985 . ‘Developmental Constraints and Evolution,’ . Quarterly Review of Biology , 60 : 265 – 81 .
   Web of Science ®Google Scholar
• Mayr , E. 1980 . The Evolutionary Synthesis Edited by: Mayr , E. and Provine , W. B. Cambridge , Ma : Harvard University Press . ‘Prologue: Some Thoughts on the History of the Evolutionary Synthesis.’ In.
   Google Scholar
• Miklos , G. L.G. 1985 . Molecular Evolutionary Genetics Edited by: MacIntyre , R. J. New York : Plenum Press . ‘Localized Highly Repetitive DNA Sequences in Vertebrate and Invertebrate Genomes.’ In.
   Google Scholar
• Monod , J. 1971 . Chance and Necessity: An Essay on the Natural Philosophy of Modern Biology New York : Random House . (Trans. A. Wainhouse).
   Google Scholar
• Orgel , L. E. and Crick , F. H.C. 1980 . ‘Selfish DNA: The Ultimate Parasite,’ . Nature , 284 : 604 – 7 .
   PubMed Web of Science ®Google Scholar
• Rose , M. R. and Doolittle , W. F. 1983 . ‘Molecular Biological Models of Speciation,’ . Science , 220 : 157 – 62 .
   Google Scholar
• Salthe , S. N. 1985 . Evolving Hierarchical Systems New York : Columbia University Press .
   Google Scholar
• Sober , E. 1984 . The Nature of Selection: Evolutionary Theory in Philosophical Focus Cambridge , Ma : MIT Press .
   Google Scholar
• Stanley , S. M. 1979 . Macroevolution San Francisco : W.H. Freeman .
   Google Scholar
• Vrba , E. S. 1984 . Systematic Zoology , 33 : 318 – 28 . ‘What is Species Selection?
   Google Scholar
• Vrba , E. S. and Eldredge , N. 1984 . ‘Individuals, Hierarchies and Processes: Towards a More Complete Evolutionary Theory,’ . Paleobiology , 10 : 147 – 71 .
   Google Scholar